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  <front>
    <journal-meta><journal-id journal-id-type="publisher">GChron</journal-id><journal-title-group>
    <journal-title>Geochronology</journal-title>
    <abbrev-journal-title abbrev-type="publisher">GChron</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Geochronology</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">2628-3719</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/gchron-3-299-2021</article-id><title-group><article-title>Spatially resolved infrared radiofluorescence: single-grain
K-feldspar dating using CCD imaging</article-title><alt-title>Spatially resolved infrared radiofluorescence</alt-title>
      </title-group><?xmltex \runningtitle{Spatially resolved infrared radiofluorescence}?><?xmltex \runningauthor{D. Mittelstraß and S. Kreutzer}?>
      <contrib-group>
        <contrib contrib-type="author" equal-contrib="yes" corresp="yes" rid="aff1">
          <name><surname>Mittelstraß</surname><given-names>Dirk</given-names></name>
          <email>dirk.mittelstrass@luminescence.de</email>
        <ext-link>https://orcid.org/0000-0002-9567-8791</ext-link></contrib>
        <contrib contrib-type="author" equal-contrib="yes" corresp="yes" rid="aff2 aff3">
          <name><surname>Kreutzer</surname><given-names>Sebastian</given-names></name>
          <email>sebastian.kreutzer@aber.ac.uk</email>
        <ext-link>https://orcid.org/0000-0002-0734-2199</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>independent researcher: Berthelsdorfer Str. 13, 09599
Freiberg, Germany</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Geography &amp; Earth Sciences, Aberystwyth University, Aberystwyth, Wales,
United Kingdom</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>IRAMAT-CRP2A, UMR 5060, CNRS-Université Bordeaux Montaigne,
Pessac, France</institution>
        </aff><author-comment content-type="econtrib"><p>These authors contributed equally to this work.</p></author-comment>
      </contrib-group>
      <author-notes><corresp id="corr1">Dirk Mittelstraß (dirk.mittelstrass@luminescence.de) and Sebastian Kreutzer
(sebastian.kreutzer@aber.ac.uk)</corresp></author-notes><pub-date><day>21</day><month>May</month><year>2021</year></pub-date>
      
      <volume>3</volume>
      <issue>1</issue>
      <fpage>299</fpage><lpage>319</lpage>
      <history>
        <date date-type="received"><day>31</day><month>December</month><year>2020</year></date>
           <date date-type="rev-request"><day>28</day><month>January</month><year>2021</year></date>
           <date date-type="rev-recd"><day>29</day><month>March</month><year>2021</year></date>
           <date date-type="accepted"><day>1</day><month>April</month><year>2021</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2021 Dirk Mittelstraß</copyright-statement>
        <copyright-year>2021</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://gchron.copernicus.org/articles/3/299/2021/gchron-3-299-2021.html">This article is available from https://gchron.copernicus.org/articles/3/299/2021/gchron-3-299-2021.html</self-uri><self-uri xlink:href="https://gchron.copernicus.org/articles/3/299/2021/gchron-3-299-2021.pdf">The full text article is available as a PDF file from https://gchron.copernicus.org/articles/3/299/2021/gchron-3-299-2021.pdf</self-uri>
      <abstract><title>Abstract</title>
    <p id="d1e107">The success of luminescence dating as a chronological tool in Quaternary
science builds upon innovative methodological approaches, providing new
insights into past landscapes. Infrared radiofluorescence (IR-RF) on
K-feldspar is such an innovative method that was already introduced two decades
ago. IR-RF promises considerable extended temporal range and a simple
measurement protocol, with more dating applications being published recently.
To date, all applications have used multi-grain measurements. Herein, we take
the next step by enabling IR-RF measurements on a single grain level.
Our contribution introduces spatially resolved infrared
radiofluorescence (SR IR-RF) on K-feldspars and intends to make SR IR-RF
broadly accessible as a geochronological tool. In the first part of the
article, we detail equipment, CCD camera settings and software needed
to perform and analyse SR IR-RF measurements. We use a newly developed
ImageJ macro to process the image data, identify IR-RF emitting
grains and obtain single-grain IR-RF signal curves. For subsequent
analysis, we apply the statistical programming environment R and
the package <monospace>Luminescence</monospace>. In the second part of the article, we
test SR IR-RF on two K-feldspar samples. One sample was irradiated
artificially; the other sample received a natural dose. The artificially
irradiated sample renders results indistinguishable from conventional
IR-RF measurements with the photomultiplier tube. The natural sample
seems to overestimate the expected dose by ca. 50 % on average. However,
it also shows a lower dose component, resulting in ages consistent with
the same sample's quartz fraction. Our experiments also revealed an
unstable signal background due to our cameras' degenerated cooling
system. Besides this technical issue specific to the system we used, SR
IR-RF is ready for application. Our contribution provides guidance and
software tools for methodological and applied luminescence (dating)
studies on single-grain feldspars using radiofluorescence.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e122">During the last two decades of advances in
luminescence-based chronologies, two promising developments stand out
but somehow never took off: (1) spatially resolved (SR) detection of
optical and thermoluminescence signals and (2) infrared
radiofluorescence (IR-RF) of potassium feldspar (K-feldspar). Our
perception is that the most significant obstacles in both approaches lie
in imperfections of the available instrumentation and the complexity of
the data analysis.</p>
      <p id="d1e125">Although aware of this, we draw upon both developments, SR and IR-RF,
and present a new approach: spatially resolved
infrared radiofluorescence (henceforth: SR IR-RF) for measuring
K-feldspar on a single grain level. This article has two parts. After
a brief literature review, the first part will outline the technical
aspects and the data analysis methods. The second part will test and
apply the developed approach.</p>
      <p id="d1e128">As it concerns our article's technical part, we attempt to summarise
our work on SR IR-RF of K-feldspar carried out since 2015. We will
present a detailed workflow, a new<?pagebreak page300?> software toolchain, guidelines and
technical suggestions like the parameterisation of the used EM-CCD
camera.</p>
      <p id="d1e131">In the application part of our article, we will present a first test
of the hypothesis of whether SR IR-RF allows deciphering single feldspar
grains' bleaching history. We used a sample from the Médoc area
(south-western France) previously dated using non-spatially resolved IR-RF
for this test.</p>
<sec id="Ch1.S1.SS1">
  <label>1.1</label><title>Spatially resolved luminescence dating</title>
      <p id="d1e142">Conventional luminescence readers rely on photomultiplier tubes (PMTs) to
detect luminescence emissions
<xref ref-type="bibr" rid="bib1.bibx3 bib1.bibx4 bib1.bibx55 bib1.bibx46" id="paren.1"><named-content content-type="pre">e.g.</named-content></xref>.
However, equivalent dose (<inline-formula><mml:math id="M1" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) distributions deduced from
multiple-grain aliquots tend to scatter more than individual analytical
uncertainties can explain (for a brief overview on various
reasons, see <xref ref-type="bibr" rid="bib1.bibx20" id="altparen.2"/>), and a PMT does not allow
distinguishing simultaneously emitted signals from individual grains.</p>
      <p id="d1e164">Single-grain systems, such as employed by
<xref ref-type="bibr" rid="bib1.bibx5" id="text.3"/>, use a laser to optically
stimulate luminescence <xref ref-type="bibr" rid="bib1.bibx33" id="paren.4"><named-content content-type="pre">OSL,</named-content></xref> single
grains sequentially. Hence, luminescence is collected grain-wise.
However, such a system does not suite when (1) the stimulation (heating,
irradiation) can only be applied simultaneously to all grains, or (2)
spatial mapping of the sample is desired
<xref ref-type="bibr" rid="bib1.bibx12" id="paren.5"><named-content content-type="pre">e.g.</named-content></xref>. For these reasons, luminescence
imaging systems have been subject of research since, at least, the 1980s
<xref ref-type="bibr" rid="bib1.bibx32" id="paren.6"><named-content content-type="pre">cf.</named-content></xref>. In the 1990s, charged coupled device
(CCD) cameras became affordable and gained attraction for luminescence
detection due to their high quantum efficiency in conjunction with a
relatively simple technical implementation into existing systems. A
variety of experimental and commercial image systems based on CCD
cameras were developed
<xref ref-type="bibr" rid="bib1.bibx13 bib1.bibx57 bib1.bibx24 bib1.bibx2 bib1.bibx9 bib1.bibx8 bib1.bibx27 bib1.bibx35 bib1.bibx15" id="paren.7"/>.
However, the number of publications making use of those systems in the
context of actual dating appears to be surprisingly small
<xref ref-type="bibr" rid="bib1.bibx25 bib1.bibx52 bib1.bibx14" id="paren.8"><named-content content-type="pre">e.g.</named-content></xref>.</p>
      <p id="d1e194">Reasons for this lag of attention might be found in the technical
complexity of luminescence imaging systems, combined with significant
issues such as image noise or signal cross-talk
<xref ref-type="bibr" rid="bib1.bibx28 bib1.bibx10" id="paren.9"/>. Thus,
luminescence imaging methods appear challenging to apply, and the
efforts necessary to analyse the measurements might be considered
disproportional to the scientific gain. To prevent spatially resolved
IR-RF from failing for the same reasons, we intend to provide our
software and methods as accessible, transparent and automated as
possible.</p><?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S1.SS2">
  <label>1.2</label><title>The brief history of spatially resolved IR-RF dating</title>
      <p id="d1e209">IR-RF dating applies ionising radiation to stimulate a fluorescence
signal in K-feldspar at a wavelength of around 865 nm
<xref ref-type="bibr" rid="bib1.bibx60" id="paren.10"/>. This IR-RF signal decays with the
accumulation of dose and resets through optical bleaching (e.g. a few
hours to days of sunlight exposure). Determining ages up to
ca. 600 ka is reported in the literature
<xref ref-type="bibr" rid="bib1.bibx63" id="paren.11"/>.</p>
      <p id="d1e218">The early development of conventional non-spatially resolved IR-RF as
dating technique was an effort of the group led by Matthias Krbetschek
at the TU Freiberg (Germany)
<xref ref-type="bibr" rid="bib1.bibx59 bib1.bibx60 bib1.bibx37 bib1.bibx18" id="paren.12"/>.
Their work cumulated in the infrared radiofluorescence single aliquot
regenerative-dose (IRSAR) protocol <xref ref-type="bibr" rid="bib1.bibx17" id="paren.13"/>. Although
the IRSAR protocol is straightforward and promises extended temporal
range, its invention had limited impact on the dating practice in
Quaternary science <xref ref-type="bibr" rid="bib1.bibx49" id="paren.14"><named-content content-type="pre">see</named-content><named-content content-type="post"> for a detailed review</named-content></xref>.</p>
      <p id="d1e234">One particular issue is the low bleachability of the IR-RF signal
(at least 2 h of natural
sunlight, <xref ref-type="bibr" rid="bib1.bibx60" id="altparen.15"/>), which potentially provokes
partial bleaching effects. Other issues are potential inhomogeneities in
the mineral composition and micro-dosimetry of the sample
<xref ref-type="bibr" rid="bib1.bibx61" id="paren.16"/>.</p>
      <p id="d1e243">Seeking a technical solution,
<xref ref-type="bibr" rid="bib1.bibx36" id="text.17"/><fn id="Ch1.Footn1"><p id="d1e248">These results were never formally published. However, we are happy to share their presentation on the 11th International LED conference (2005, Cologne, Germany) upon request.</p></fn>
conducted first spatially resolved (SR) IR-RF measurements on feldspars.
In their experiment, the sample was irradiated from below with a
<inline-formula><mml:math id="M2" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">90</mml:mn></mml:msup></mml:math></inline-formula>Sr <inline-formula><mml:math id="M3" display="inline"><mml:mrow><mml:mo>/</mml:mo><mml:msup><mml:mi/><mml:mn mathvariant="normal">90</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>Y <inline-formula><mml:math id="M4" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> source. The RF signal was collected by
a 45<inline-formula><mml:math id="M5" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> mirror and a custom-made imaging optic, with the signal
detected through an electron multiplying (EM) CCD camera. Images were
analysed using the software AgesGalore
<xref ref-type="bibr" rid="bib1.bibx26" id="paren.18"/>.</p>
      <p id="d1e294">When Matthias Krbetschek joined Freiberg Instruments GmbH, the capability
of performing SR IR-RF measurements became part of the design of the
commercial available lexsyg research reader
<xref ref-type="bibr" rid="bib1.bibx54" id="paren.19"/>. Contrary to the original design by
<xref ref-type="bibr" rid="bib1.bibx36" id="text.20"/>, in this system, the
<inline-formula><mml:math id="M6" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">90</mml:mn></mml:msup></mml:math></inline-formula>Sr <inline-formula><mml:math id="M7" display="inline"><mml:mrow><mml:mo>/</mml:mo><mml:msup><mml:mi/><mml:mn mathvariant="normal">90</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>Y source is placed above the sample position. A
circular opening in the middle of the source module enables luminescence
detection <xref ref-type="bibr" rid="bib1.bibx53" id="paren.21"/>. A sketch of this
lexsyg research RF imaging module is shown in
Fig. <xref ref-type="fig" rid="Ch1.F1"/>. With the early death of M. Krbetschek in 2012,
the progression in the SR IR-RF technique's development came to a
temporary halt.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><?xmltex \def\figurename{Figure}?><label>Figure 1</label><caption><p id="d1e332"><bold>(a)</bold> Technical sketch of the camera system for spatially resolved IR-RF measurements at the lexsyg research reader L2 in Bordeaux. The collimating lens position and the camera's height were adjusted manually to obtain the best IR-RF image quality. <bold>(b)</bold> Typical image output of a natural IR-RF image stack. The upper picture shows an unprocessed but background-corrected SR IR-RF image taken with high SNR setting (see Table <xref ref-type="table" rid="Ch1.T2"/>). Two speckle noise events caused by bremsstrahlung (white) and two grain IR-RF signals (yellow) are marked. Individual grain signals are hardly distinguishable from the image noise. The lower image shows the processed image stack's median image, where light from individual grains is visible. The dashed white line marks the rim of the sample carrier (here a stainless-steel cup).</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gchron.copernicus.org/articles/3/299/2021/gchron-3-299-2021-f01.png"/>

        </fig>

<?xmltex \hack{\newpage}?>
</sec>
</sec>
<?pagebreak page301?><sec id="Ch1.S2">
  <label>2</label><title>Part I: enabling spatially resolved
radiofluorescence</title>
      <p id="d1e359">In the following section, we outline technical aspects of relevance for
successful SR IR-RF measurements. Although we were bounded to tailor
some settings to a particular system, the overall parameterisation and
the developed workflow is fairly system independent. More detailed
information is available in the Appendix and the referenced resources.</p>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Equipment</title>
      <p id="d1e369">All measurements presented in this article were performed on a single
Freiberg Instruments lexsyg research reader
<xref ref-type="bibr" rid="bib1.bibx54" id="paren.22"/> at the IRAMAT-CRP2A in Bordeaux (reader name
L2). The system is equipped with a ring-shape type
<inline-formula><mml:math id="M8" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">90</mml:mn></mml:msup></mml:math></inline-formula>Sr <inline-formula><mml:math id="M9" display="inline"><mml:mrow><mml:mo>/</mml:mo><mml:msup><mml:mi/><mml:mn mathvariant="normal">90</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>Y <inline-formula><mml:math id="M10" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> source <xref ref-type="bibr" rid="bib1.bibx53" id="paren.23"/>
delivering ca. 3.5 Gy min<inline-formula><mml:math id="M11" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> to K-feldspar grains with a size
of 125–250 <inline-formula><mml:math id="M12" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m <xref ref-type="bibr" rid="bib1.bibx22" id="paren.24"><named-content content-type="pre">cf.</named-content></xref>.</p>
      <p id="d1e432">For luminescence detection, we used a Princeton Instruments ProEM:
512B+ eXcelon EMCCD camera with a <inline-formula><mml:math id="M13" display="inline"><mml:mrow><mml:mn mathvariant="normal">512</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">512</mml:mn></mml:mrow></mml:math></inline-formula> pixel unichromatic
back-illuminated CCD sensor. The camera sits on an automated detector
changer, which allows also for spatially resolved thermal
luminescence (TL) and OSL
measurements
<xref ref-type="bibr" rid="bib1.bibx54 bib1.bibx27" id="paren.25"><named-content content-type="pre">cf.</named-content></xref>. The
camera has a quantum efficiency (QE) of <inline-formula><mml:math id="M14" display="inline"><mml:mrow><mml:mi mathvariant="italic">⩾</mml:mi><mml:mn mathvariant="normal">80</mml:mn></mml:mrow></mml:math></inline-formula> % between
450 and 750 nm. At the K-feldspar IR-RF emission
centred at ca. 865 nm the QE is around 60 %. For the IR-RF
measurements, we placed a Chroma D850/40x interference filter
between <inline-formula><mml:math id="M15" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> source and EMCCD camera. The custom-made optic has a
numerical aperture (NA) of about 0.2 and a lateral magnification of 0.6,
leading to an image resolution of 27 <inline-formula><mml:math id="M16" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m per pixel. Prior to
our experiments, we adjusted the optical focus by manually calibrating
the camera's installation height until we obtained the best image
quality in terms of sharpness and minimised distortion. The nearby
<inline-formula><mml:math id="M17" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">90</mml:mn></mml:msup></mml:math></inline-formula>Sr <inline-formula><mml:math id="M18" display="inline"><mml:mrow><mml:mo>/</mml:mo><mml:msup><mml:mi/><mml:mn mathvariant="normal">90</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>Y <inline-formula><mml:math id="M19" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> source shielding emits secondary X-ray
photons <xref ref-type="bibr" rid="bib1.bibx45" id="paren.26"><named-content content-type="pre">bremsstrahlung, cf.</named-content></xref>,
which induce localised high signal events at the CCD chip upon impact.
The result is images speckled with bright spots (see
Fig. <xref ref-type="fig" rid="Ch1.F1"/>b). We will refer to this effect as “speckle
noise”. It has to be noted that naturally occurring cosmic rays also
cause similar bright spots. However, we approximated that cosmic rays
are responsible for less than 1 % of the spots.</p>
      <p id="d1e513">The system was equipped with a solar light simulator (SLS) system
facilitating LEDs with broad peaks centred at 365,
462, 523, 590, 625 and
850 nm <xref ref-type="bibr" rid="bib1.bibx54" id="paren.27"/>. The system is the same as
used for the experiments by <xref ref-type="bibr" rid="bib1.bibx21" id="text.28"/> and
<xref ref-type="bibr" rid="bib1.bibx22" id="text.29"/>.</p>
      <?pagebreak page302?><p id="d1e525">However, over the years, the system received a couple of hardware
upgrades tackling various problems <xref ref-type="bibr" rid="bib1.bibx41" id="paren.30"><named-content content-type="pre">cf.</named-content></xref>.
In 2018, an improved drive train for the sample arm,
modernised control hardware and a new 100 W at
48 V Si<inline-formula><mml:math id="M20" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>N<inline-formula><mml:math id="M21" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> heater controlled by a PT1000
thermocouple were installed (personal communication, Freiberg Instruments
GmbH, 2019).</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Software</title>
      <p id="d1e559">Our software toolchain consisted of three different tools:
LexStudio 2 for measurement sequence control, ImageJ for
image processing and the R function library <monospace>Luminescence</monospace> for data
analysis. ImageJ and the <monospace>Luminescence</monospace> package are
open-source (GPL-3 licence) and freely available for all major platforms
(Windows, Linux, macOS). However, our software
toolchain was tested so far just on Windows 10 and macOS
(v10–v11). Detailed installation guides and additional download links
to the SR IR-RF-specific software modules can be found at
<uri>https://luminescence.de/</uri> (last access: 28 March 2021).</p>
<sec id="Ch1.S2.SS2.SSS1">
  <label>2.2.1</label><title>Image acquisition with
LexStudio 2</title>
      <p id="d1e578">We used the software LexStudio 2 (version 2.5.0, 2019-11-01)
shipped with the measurement system for sequence writing, camera
parameterisation and image acquisition. For the presented work, Freiberg
Instruments updated LexStudio 2 in 2018/2019 with a new module to
control the camera settings relevant for luminescence imaging (Fig. <xref ref-type="fig" rid="Ch1.F2"/>a). The new module also enables sequence-synchronous
camera control and data handling. Thus, sequence writing does not differ
from routine luminescence measurements with a PMT. The new
LexStudio 2 camera module uses the 32-bit PVCAM drivers by
Princeton Instruments and maintains the compatibility to the camera
control software WinView shipped with the ProEM camera.
Unfortunately, this enhanced version of LexStudio 2 is currently
bound to 32-bit Microsoft Windows platforms. The obtained data, however,
can be separately processed and analysed on other computers with other
platforms. The data consist of one image stack for each RF measurement,
saved as a 16-bit greyscale TIF file. To prevent system crashes due to
the 3 GB barrier of 32-bit platforms, LexStudio 2 provides
an option to split large data sets automatically.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><?xmltex \currentcnt{2}?><?xmltex \def\figurename{Figure}?><label>Figure 2</label><caption><p id="d1e585">Screenshots of <bold>(a)</bold> the LexStudio 2 interface to parameterise the CCD camera and <bold>(b)</bold> the <monospace>SR-RF</monospace> ImageJ macro interface to analyse IR-RF images.</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gchron.copernicus.org/articles/3/299/2021/gchron-3-299-2021-f02.png"/>

          </fig>

</sec>
<sec id="Ch1.S2.SS2.SSS2">
  <label>2.2.2</label><title>Image processing with
ImageJ</title>
      <p id="d1e611">For processing the image data, we used the open-source software
ImageJ (version: 1.52p) <xref ref-type="bibr" rid="bib1.bibx56" id="paren.31"/>. We developed
a macro called <monospace>SR-RF</monospace> (file <monospace>SR-RF.ijm</monospace>, see the Supplement) to
automatise the workflow. The <monospace>SR-RF</monospace> macro is a plain ASCII file and
written in the JavaScript-like ImageJ macro language. It provides
a graphical user interface (Fig. <xref ref-type="fig" rid="Ch1.F2"/>b) to simplify
user interactions. The output is an ASCII text file with the file-ending
<monospace>*.rf</monospace>. The file contains the single-grain IR-RF curves, the size
and spatial location of the associated regions of interests (ROIs) and
further image-processing information. We used the enhanced ImageJ
distribution Fiji (<uri>https://fiji.sc</uri>, last access: 28 March 2021) (version: 2.0.0-rc-69)
for most of our analyses. A cross-platform version of ImageJ and
the <monospace>SR-RF</monospace> macro and all necessary plug-ins pre-installed can be
downloaded from
<uri>https://luminescence.de/</uri> (last access: 28 March 2021). A short
description of how to install the <monospace>SR-RF</monospace> macro and its dependencies and
detailed documentation of the macro can also be found on our website.
Interfacing of the macro to other programs is possible through the
additionally supported ImageJ batch mode.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS3">
  <label>2.2.3</label><title>Data analysis with R</title>
      <p id="d1e652">We employed the statistical programming environment R
<xref ref-type="bibr" rid="bib1.bibx51" id="paren.32"/> and the package <monospace>Luminescence</monospace>
<xref ref-type="bibr" rid="bib1.bibx40 bib1.bibx43" id="paren.33"/> for processing the IR-RF
single-grain data.</p>
      <p id="d1e664">Therefore, we developed two new functions for a seamless data import and
processing of <monospace>*.rf</monospace> files:
<monospace>read_RF2R()</monospace> and
<monospace>plot_ROI()</monospace> (<monospace>Luminescence</monospace> <inline-formula><mml:math id="M22" display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> v0.9.8). Both
functions work in conjunction with the already available function
<monospace>analyse_IRSAR.RF()</monospace>. See below for an application
example.</p>
      <p id="d1e690">Advanced users can also deploy our experimental R package dedicated to
spatially resolved luminescence data analysis called <monospace>RLumSTARR</monospace>
<xref ref-type="bibr" rid="bib1.bibx38" id="paren.34"/>. The sole relevance of <monospace>RLumSTARR</monospace> for this
contribution is the function <monospace>run_ImageJ()</monospace>. We used
this function to run ImageJ in a batch mode and autoprocess our
image data. However, <monospace>RLumSTARR</monospace> is not required to analyse SR IR-RF
data.</p>
</sec>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Measurement protocol</title>
      <p id="d1e717">We applied the RF<inline-formula><mml:math id="M23" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">70</mml:mn></mml:msub></mml:math></inline-formula> single aliquot protocol by
<xref ref-type="bibr" rid="bib1.bibx22" id="text.35"/>, an improved version of the IRSAR protocol
<xref ref-type="bibr" rid="bib1.bibx17" id="paren.36"/>. The RF<inline-formula><mml:math id="M24" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">70</mml:mn></mml:msub></mml:math></inline-formula> sequence (Table <xref ref-type="table" rid="Ch1.T1"/>) includes two IR-RF measurements: one for the natural
signal (RF<inline-formula><mml:math id="M25" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula>) and one for the regenerated signal (RF<inline-formula><mml:math id="M26" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula>).
In the data analysis process, the RF<inline-formula><mml:math id="M27" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula> signal curve is slid
vertically and horizontally along the signal curve until the best match is achieved with the
RF<inline-formula><mml:math id="M28" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula> curve. The horizontal sliding distance is the accumulated
dose needed to match the natural RF signal, thus defining the equivalent
dose <xref ref-type="bibr" rid="bib1.bibx50" id="paren.37"/>. Measurement durations are
user-defined. However, RF<inline-formula><mml:math id="M29" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula> should be longer than the sample's
expected natural dose. RF<inline-formula><mml:math id="M30" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula> should not contain fewer than 70 data
points (in our case images) to give sufficient statistical confidence
when using the sliding method (<xref ref-type="bibr" rid="bib1.bibx22" id="altparen.38"/>, their supplement, proposed at least
40 channels for a resolution of 15 s/channel).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e811">Applied IR-RF measurement sequence according to the RF<inline-formula><mml:math id="M31" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">70</mml:mn></mml:msub></mml:math></inline-formula> protocol by <xref ref-type="bibr" rid="bib1.bibx22" id="text.39"/>.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">No.</oasis:entry>
         <oasis:entry colname="col2">Step</oasis:entry>
         <oasis:entry colname="col3">Treatment</oasis:entry>
         <oasis:entry colname="col4">Measurement</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">1</oasis:entry>
         <oasis:entry colname="col2">Shallow trap depletion</oasis:entry>
         <oasis:entry colname="col3">Preheat at 70 <inline-formula><mml:math id="M32" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for 900 s</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">2</oasis:entry>
         <oasis:entry colname="col2">Natural dose IR-RF</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M33" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> irradiation at 70 <inline-formula><mml:math id="M34" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for  <inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:mtext mathvariant="monospace">&lt;user defined time&gt;</mml:mtext><mml:mspace linebreak="nobreak" width="0.125em"/></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">RF<inline-formula><mml:math id="M36" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3</oasis:entry>
         <oasis:entry colname="col2">Signal resetting</oasis:entry>
         <oasis:entry colname="col3">Bleaching with in-built solar simulator for 3 h</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">4</oasis:entry>
         <oasis:entry colname="col2">Wait for phosphorescence to decay</oasis:entry>
         <oasis:entry colname="col3">Pause for 1 h</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">5</oasis:entry>
         <oasis:entry colname="col2">Shallow trap depletion</oasis:entry>
         <oasis:entry colname="col3">Preheat at 70 <inline-formula><mml:math id="M37" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for 900 s</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">6</oasis:entry>
         <oasis:entry colname="col2">Regenerative dose IR-RF</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M38" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> irradiation at 70 <inline-formula><mml:math id="M39" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for  <inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:mtext mathvariant="monospace">&lt;user defined time&gt;</mml:mtext><mml:mspace linebreak="nobreak" width="0.125em"/></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">RF<inline-formula><mml:math id="M41" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e1032">We used the comparable solar simulator settings as in
<xref ref-type="bibr" rid="bib1.bibx22" id="text.40"/><fn id="Ch1.Footn2"><p id="d1e1037">Contrary to what is quoted erroneously in <xref ref-type="bibr" rid="bib1.bibx22" id="text.41"/>, these settings are identical to the bleaching settings applied by <xref ref-type="bibr" rid="bib1.bibx22" id="text.42"/> for their measurements.</p></fn>:
365 nm: 20 mW cm<inline-formula><mml:math id="M42" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, 462 nm:
61 mW cm<inline-formula><mml:math id="M43" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, 525 nm: 53 mW cm<inline-formula><mml:math id="M44" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
590 nm: 37 mW cm<inline-formula><mml:math id="M45" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, 623 nm:
112 mW cm<inline-formula><mml:math id="M46" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, 850 nm: 94 mW cm<inline-formula><mml:math id="M47" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. In our
bleaching protocol, the UV power settings are doubled in comparison to
the recommendations by <xref ref-type="bibr" rid="bib1.bibx21" id="text.43"/>. This setting may lead to an
unwanted temperature increase in the sample. However, we carefully
monitored the temperature as recorded by the thermocouple in the
reader's sample arm. We found the temperature stable at
70 <inline-formula><mml:math id="M48" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for all measurements (data not
shown), indicating that the temperature in the samples was stable.</p>
</sec>
<?pagebreak page303?><sec id="Ch1.S2.SS4">
  <label>2.4</label><title>Camera settings</title>
      <p id="d1e1141">While the enhanced LexStudio 2 version automates image
acquisition, it does not free the user from parameterising the camera. In
the following, we will advise on the most relevant camera settings and
their impact on image noise and signal sensitivity. We derive parts of
our advice from signal-to-noise ratio (SNR) estimations summarised in
Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>. Table <xref ref-type="table" rid="Ch1.T2"/> lists major
correlations between CCD camera settings and data quality. Table <xref ref-type="table" rid="Ch1.T3"/> lists the camera settings we used in our experiments. For
more in-depth insights into the scientific CCD camera technology we may
refer to <xref ref-type="bibr" rid="bib1.bibx34" id="text.44"/> and the Andor Learning
Centre (<uri>https://andor.oxinst.com/learning/</uri>, last access: 28 March 2021; search for “Andor
Academy”).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e1159">Correlation between basic camera settings and data quality. Up arrows: increasing this parameter leads to an increase of, for example, noise, time span and intensity. Down arrow: increasing this parameter leads to a decrease of the corresponding attribute. Right arrow: changed parameter settings do not affect the attribute.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
     <oasis:colspec colnum="3" colname="col3" align="center"/>
     <oasis:colspec colnum="4" colname="col4" align="center" colsep="1"/>
     <oasis:colspec colnum="5" colname="col5" align="center"/>
     <oasis:colspec colnum="6" colname="col6" align="center"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Camera setting</oasis:entry>
         <oasis:entry rowsep="1" namest="col2" nameend="col4" colsep="1">Source of information loss </oasis:entry>
         <oasis:entry rowsep="1" namest="col5" nameend="col6">Data quality </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Readout noise</oasis:entry>
         <oasis:entry colname="col3">Dark noise</oasis:entry>
         <oasis:entry colname="col4">Dead time</oasis:entry>
         <oasis:entry colname="col5">Signal per</oasis:entry>
         <oasis:entry colname="col6">SNR</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">per ROI and image</oasis:entry>
         <oasis:entry colname="col3">per ROI and Image</oasis:entry>
         <oasis:entry colname="col4">per image<inline-formula><mml:math id="M50" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">pixel</oasis:entry>
         <oasis:entry colname="col6"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Exposure time</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M51" display="inline"><mml:mo>⇒</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M52" display="inline"><mml:mo>⇑</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M53" display="inline"><mml:mo>⇒</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M54" display="inline"><mml:mo>⇑</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M55" display="inline"><mml:mo>⇑</mml:mo></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Readout rate</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M56" display="inline"><mml:mo>⇑</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M57" display="inline"><mml:mo>⇒</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M58" display="inline"><mml:mo>⇓</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M59" display="inline"><mml:mo>⇒</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M60" display="inline"><mml:mo>⇓</mml:mo></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Pixel binning</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M61" display="inline"><mml:mo>⇓</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M62" display="inline"><mml:mo>⇒</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M63" display="inline"><mml:mo>⇓</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M64" display="inline"><mml:mo>⇑</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M65" display="inline"><mml:mo>⇑</mml:mo></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CCD temperature</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M66" display="inline"><mml:mo>⇒</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M67" display="inline"><mml:mo>⇑</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M68" display="inline"><mml:mo>⇒</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M69" display="inline"><mml:mo>⇒</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M70" display="inline"><mml:mo>⇓</mml:mo></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e1162"><inline-formula><mml:math id="M49" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula> camera dead time occurs only if a sequential CCD chip readout mode is applied (full-frame mode).</p></table-wrap-foot></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3"><?xmltex \currentcnt{3}?><label>Table 3</label><caption><p id="d1e1449">Recommended settings for a Princeton Instruments ProEM512 camera employed in a Freiberg Instruments lexsyg research system.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Camera setting</oasis:entry>
         <oasis:entry colname="col2">High SNR (default)</oasis:entry>
         <oasis:entry colname="col3">Full resolution</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Channel width</oasis:entry>
         <oasis:entry colname="col2">5 s</oasis:entry>
         <oasis:entry colname="col3">5 s</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Exposure time</oasis:entry>
         <oasis:entry colname="col2">4.15 s</oasis:entry>
         <oasis:entry colname="col3">4.5 s</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Readout rate</oasis:entry>
         <oasis:entry colname="col2">100 kHz</oasis:entry>
         <oasis:entry colname="col3">1 MHz</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Pixel binning</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">off (<inline-formula><mml:math id="M72" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<sec id="Ch1.S2.SS4.SSS1">
  <label>2.4.1</label><title>Set the CCD chip temperature low, but not too
low</title>
      <p id="d1e1559">One primary source of image noise arises from the dark current of the
CCD chip. The dark current is highly temperature-dependent; see
Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>2 or Fig. S1 for the exact relation.
The camera has a built-in thermoelectric cooling system to cool the CCD
chip far below room temperature and thus effectively suppressing dark
current related image noise. For the camera we used, the lowest
reachable CCD temperature is in theory at about <inline-formula><mml:math id="M73" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">75</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M74" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C if no additional
external cooling is applied. For the user, it seems obvious to set the
target CCD temperature as low as the cooling system allows. However, we
strongly recommend setting the target<?pagebreak page304?> temperature between 10
and 15 K above the technical minimum. An RF measurement takes
hours, enough time for the camera electronics to warm up or for changes
in the system temperature. The resulting fluctuations in the CCD temperature
induce changes in the background signal level during the RF measurement.
These background instabilities are hard to correct in the
post-processing. Therefore, a stationary CCD temperature level is
mandatory and eased by leaving the cooling system enough headroom for
corrections.</p>
</sec>
<sec id="Ch1.S2.SS4.SSS2">
  <label>2.4.2</label><title>Select a slow readout rate, but not too slow</title>
      <p id="d1e1591">The CCD chip readout process induces another source of image noise
called read noise or readout noise (cf. standard textbooks for both
notations). Longer exposure times lead to better SNR because more signal
is gathered while the readout noise remains constant.</p>
      <p id="d1e1594">Another way to reduce readout noise is to choose a slow CCD readout
rate. In our system, the slowest available readout rate is
100 kHz. At this rate, a full-resolution
(<inline-formula><mml:math id="M75" display="inline"><mml:mrow><mml:mn mathvariant="normal">512</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">512</mml:mn></mml:mrow></mml:math></inline-formula> px) CCD readout takes 2.13 s. If the
readout process lasts longer than the RF measurement channel, either
images are lost or the camera runs asynchronous to the measurement
sequence. In our systems, the readout process started after the preset
time interval for the image exposure ended. The camera is then locked
until the image data are transferred to the computer. Thus, the user has
to incorporate a camera dead time when parameterising channel width and
exposure time in the camera's sequence settings; see
Table <xref ref-type="table" rid="Ch1.T3"/> and Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>. However, all
modern scientific CCD cameras, including our ProEM camera, can
read out the last image while already gathering signal light for the
next image.
The camera dead time is a setting particular to the LexStudio 2
software solution we used. Later software iterations or more advanced
systems might set exposure time and channel width equal by default.</p>
</sec>
<sec id="Ch1.S2.SS4.SSS3">
  <label>2.4.3</label><title>Do not use EM gain</title>
      <p id="d1e1621">EM-CCD cameras have an electron-multiplying (EM) register that amplifies
the detected signals above readout noise if activated. The EM mode
allows for highly sensitive high-frame-rate imaging, but it comes at
a cost: (1) it induces an additional source of image noise (excess
noise), (2) it reduces the dynamic range and the linearity of the signal
acquisition, (3) it amplifies dark current signals and thus dark noise,
and (4) it amplifies local pixel over-exposures leading to pixel-well
overflows. Especially the last point is problematic for RF imaging. If
the speckle noise caused by bremsstrahlung gets amplified by the
EM mode, streaks with increased signal values appear on the image. These
are hard to remove by image-processing algorithms.</p>
</sec>
<sec id="Ch1.S2.SS4.SSS4">
  <label>2.4.4</label><title>Consider hardware pixel binning</title>
      <?pagebreak page305?><p id="d1e1632">The most straightforward approach to improving the SNR and the signal
sensitivity is pixel binning performed by the CCD camera image-processing software like ImageJ. This software pixel binning,
however, is less effective than potential hardware binning by the
camera. With applied hardware pixel binning, multiple pixels are
considered as one pixel and read out together. This feature reduces the
readout noise per imaged area and reduces the readout time and therefore
the camera dead time (if applicable). As a side effect, the image
stacks' file size is also reduced, positively impacting image processing
time. We applied <inline-formula><mml:math id="M76" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> pixel binning as a default setting and
deactivated it only if we had sufficiently bright samples. On the
downside, pixel binning lowers the camera resolution to
<inline-formula><mml:math id="M77" display="inline"><mml:mrow><mml:mn mathvariant="normal">256</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">256</mml:mn></mml:mrow></mml:math></inline-formula> pixel, corresponding to a decreased spatial
resolution of 54 <inline-formula><mml:math id="M78" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m (before 27 <inline-formula><mml:math id="M79" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m).</p>
</sec>
</sec>
<sec id="Ch1.S2.SS5">
  <label>2.5</label><title>Image processing</title>
      <p id="d1e1684">We obtain two image stacks (a series of images) per aliquot from the RF<inline-formula><mml:math id="M80" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">70</mml:mn></mml:msub></mml:math></inline-formula> protocol.
(Table <xref ref-type="table" rid="Ch1.T1"/>). Each image stack is
saved as a <monospace>*.tif</monospace> file. Both image stacks are affected by speckle noise.
Besides, the RF<inline-formula><mml:math id="M81" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula> images might be displaced or rotated compared
to the RF<inline-formula><mml:math id="M82" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula> images due to uncertainties in the aliquot
positioning <xref ref-type="bibr" rid="bib1.bibx41" id="paren.45"/>.</p>
      <p id="d1e1723">Both issues and the grain identification are addressed by the <monospace>SR-RF</monospace>
macro in ImageJ. The image processing has four steps (Fig. <xref ref-type="fig" rid="Ch1.F3"/>): (1) speckle noise is removed, (2) both image stacks are
geometrically aligned, (3) individual grains are identified, and (4)
single-grain RF curves are extracted. Table <xref ref-type="table" rid="Ch1.T4"/> gives
recommendations for the macro settings. For more details on the macro
settings and the detailed sequence of ImageJ commands, we refer
to our <monospace>SR-RF</monospace> macro documentation available at
<uri>https://luminescence.de/</uri> (last access: 28 March 2021).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><?xmltex \currentcnt{3}?><?xmltex \def\figurename{Figure}?><label>Figure 3</label><caption><p id="d1e1741">Image-processing workflow as performed by the ImageJ macro <monospace>SR-RF.ijm</monospace>. Note: the grey step 2 images show the signal value differences between the median signal values of the natural dose RF images and the median signal values of the regenerated dose RF images. A homogeneous colour means that the images are aligned.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gchron.copernicus.org/articles/3/299/2021/gchron-3-299-2021-f03.png"/>

        </fig>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4" specific-use="star"><?xmltex \currentcnt{4}?><label>Table 4</label><caption><p id="d1e1757">Recommended <monospace>SR-RF</monospace> macro settings for the first image-processing run, depending on the sample brightness and the grain size. Parameter refinements depending on the system and the sample might be necessary. The two lower columns display the properties of the resulting single-grain IR-RF curves. The sample area diameter values assume a lateral magnification of 0.6 and a pixel size of 16 <inline-formula><mml:math id="M83" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left" colsep="1"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Macro parameter</oasis:entry>
         <oasis:entry rowsep="1" namest="col2" nameend="col3" align="center" colsep="1"><inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">50</mml:mn></mml:mrow></mml:math></inline-formula>–80 <inline-formula><mml:math id="M86" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m grain size </oasis:entry>
         <oasis:entry rowsep="1" namest="col4" nameend="col5" align="center"><inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">180</mml:mn></mml:mrow></mml:math></inline-formula>–250 <inline-formula><mml:math id="M88" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m grain size </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Bright sample at</oasis:entry>
         <oasis:entry colname="col3">Dim sample at</oasis:entry>
         <oasis:entry colname="col4">Bright sample at</oasis:entry>
         <oasis:entry colname="col5">Dim sample at</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">full resolution<inline-formula><mml:math id="M89" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">high SNR setting<inline-formula><mml:math id="M90" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">full resolution<inline-formula><mml:math id="M91" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">high SNR setting<inline-formula><mml:math id="M92" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Image group size</oasis:entry>
         <oasis:entry colname="col2">5</oasis:entry>
         <oasis:entry colname="col3">5</oasis:entry>
         <oasis:entry colname="col4">5</oasis:entry>
         <oasis:entry colname="col5">5</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Noise tolerance</oasis:entry>
         <oasis:entry colname="col2">15</oasis:entry>
         <oasis:entry colname="col3">10</oasis:entry>
         <oasis:entry colname="col4">15</oasis:entry>
         <oasis:entry colname="col5">10</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ROI diameter</oasis:entry>
         <oasis:entry colname="col2">5</oasis:entry>
         <oasis:entry colname="col3">3</oasis:entry>
         <oasis:entry colname="col4">12</oasis:entry>
         <oasis:entry colname="col5">7</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Time resolution of single-grain IR-RF curve</oasis:entry>
         <oasis:entry colname="col2">25 s</oasis:entry>
         <oasis:entry colname="col3">25 s</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M93" display="inline"><mml:mrow class="unit"><mml:mn mathvariant="normal">25</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">s</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">25 s</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Diameter of sample area covered by ROI</oasis:entry>
         <oasis:entry colname="col2">133 <inline-formula><mml:math id="M94" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m</oasis:entry>
         <oasis:entry colname="col3">160 <inline-formula><mml:math id="M95" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m</oasis:entry>
         <oasis:entry colname="col4">324 <inline-formula><mml:math id="M96" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m</oasis:entry>
         <oasis:entry colname="col5">371 <inline-formula><mml:math id="M97" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e1771"><inline-formula><mml:math id="M84" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula> refers to the recommended camera settings in Table <xref ref-type="table" rid="Ch1.T3"/>.</p></table-wrap-foot></table-wrap>

<sec id="Ch1.S2.SS5.SSS1">
  <label>2.5.1</label><title>Step 1: median filter</title>
      <p id="d1e2056">We used the ImageJ command <monospace>Grouped Z Project</monospace>
<xref ref-type="bibr" rid="bib1.bibx19" id="paren.46"/> to erase bremsstrahlung's spots. The images
of both image stacks are grouped in quantities according to the
user-defined parameter <monospace>Group Size</monospace>. Each group's images
are combined to one image by taking the median pixel value for each
pixel location. This process removes signal outliers while maintaining
the fundamental shape of the signal curve
<xref ref-type="bibr" rid="bib1.bibx62" id="paren.47"/>. Speckles caused by bremsstrahlung
occur in random locations. Hence, it is unlikely that the same pixel is
affected more than once during a time interval related to the
measurement of just a few images. The statistical likelihood of
surviving speckles increases with longer image exposure times but
decreases with larger group sizes. For the measurement system we used,
and with an exposure time of 5 s, a group size of five is
sufficient to eradicate speckle noise.</p>
</sec>
<sec id="Ch1.S2.SS5.SSS2">
  <label>2.5.2</label><title>Step 2: image alignment</title>
      <p id="d1e2079">We used the ImageJ plug-in <monospace>TurboReg</monospace> by
<xref ref-type="bibr" rid="bib1.bibx58" id="text.48"/> to detect and correct aliquot movement. It
is the same algorithm used by <xref ref-type="bibr" rid="bib1.bibx27" id="text.49"/>. The
RF<inline-formula><mml:math id="M98" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula> and the RF<inline-formula><mml:math id="M99" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula> stack are aligned by comparing their
global median images. Equal to other regression algorithms, the
differences between median images are summed up to one residual value.
The RF<inline-formula><mml:math id="M100" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula> median image is rotated and translated until the
minimum is found. The rotation and translation parameters are then
applied to all images of the RF<inline-formula><mml:math id="M101" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula> stack.</p>
      <p id="d1e2128">To interpolate the signals for the fine movement of the alignment,
ImageJ offers three methods: <monospace>none</monospace>, <monospace>bilinear</monospace> and
<monospace>bicubic</monospace> <xref ref-type="bibr" rid="bib1.bibx19" id="paren.50"/>. We tested the
interpolation methods for sample TH0 (see below, Sect. <xref ref-type="sec" rid="Ch1.S3.SS4.SSS1"/>)
and selected <monospace>bicubic</monospace> as a hidden preset value.</p>
</sec>
<sec id="Ch1.S2.SS5.SSS3">
  <label>2.5.3</label><title>Step 3: grain detection and ROI assignment</title>
      <p id="d1e2157">We used the ImageJ command <monospace>Find Maxima</monospace>
<xref ref-type="bibr" rid="bib1.bibx19" id="paren.51"/> to identify individual mineral grains, as
a reference serves the arithmetic mean image of the two median
images from step 2 (Sect. <xref ref-type="sec" rid="Ch1.S2.SS5.SSS2"/>). There, the
<monospace>Find maxima</monospace> algorithm searches for local maxima in the
pixel values. The user-defined parameter
<monospace>Noise tolerance</monospace> controls the algorithm's sensitivity,
which defines how much higher than the surrounding area a pixel value
must be. A higher <monospace>Noise tolerance</monospace> value leads to higher
robustness against optical reflections and signal outliers but a lower
grain detection likelihood. A circular ROI is assigned to each local
maximum. The diameter of these circles is user-defined through the
<monospace>ROI diameter</monospace> parameter.</p>
</sec>
<sec id="Ch1.S2.SS5.SSS4">
  <label>2.5.4</label><title>Step 4: extract single RF curves</title>
      <p id="d1e2189">We used the ImageJ <monospace>ROI manager</monospace> to obtain the arithmetic
mean of the pixel values in each ROI for each image in the RF<inline-formula><mml:math id="M102" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula>
stack and RF<inline-formula><mml:math id="M103" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula> stack. Thus, the consecutive average signal in
one ROI forms the IR-RF curve of one sample grain. These single-grain
IR-RF measurements and the lateral position of each ROI are saved into
one ASCII text file (<monospace>table.rf</monospace>) to be further analysed with
other software than ImageJ.</p>
</sec>
</sec>
<sec id="Ch1.S2.SS6">
  <label>2.6</label><title>Single-grain data analysis in R</title>
      <p id="d1e2225">We analysed the single-grain IR-RF data the same way that we would
analyse conventional PMT IR-RF measurements. A simple R script to
analyse the <monospace>table.rf</monospace> file of one aliquot reads as follows (R
package <monospace>Luminescence</monospace> <inline-formula><mml:math id="M104" display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> v0.9.8 needed):</p>
      <?pagebreak page306?><p id="d1e2241"><preformat><![CDATA[#load R package 'Luminescence'
library(Luminescence)

#import data
file <- file.choose()
RF_data <- read_RF2R(file)

#get ROI locations (optional)
ROI_data <- plot_ROI(RF_data)

#determine equivalent doses
equivalent_doses <- analyse_IRSAR.RF(
  object = RF_data,
  method = "SLIDE",
  method.control = list(
    vslide_range = "auto",
    correct_onset = FALSE))

#plot dose distribution
plot_AbanicoPlot(equivalent_doses)]]></preformat></p>
      <p id="d1e2245">Here, the new function <monospace>read_RF2R()</monospace> converts the
<monospace>table.rf</monospace> file into a list of <monospace>RLum.Analysis</monospace> objects.
Each <monospace>RLum.Analysis</monospace> object contains the RF<inline-formula><mml:math id="M105" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula> and
RF<inline-formula><mml:math id="M106" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula> curves of one ROI. The equivalent dose of each ROI is
calculated by <monospace>analyse_IRSAR.RF()</monospace>, which was already introduced
and used by <xref ref-type="bibr" rid="bib1.bibx22" id="text.52"/>. The resulting dose
distribution can be displayed and further evaluated by any of the
various functions for dose statistics the <monospace>Luminescence</monospace> package
provides. In the example above, we allowed vertical sliding after
<xref ref-type="bibr" rid="bib1.bibx50" id="text.53"/> in the function <monospace>analyse_IRSAR.RF()</monospace>
(parameter <monospace>vslide_range</monospace>). Vertical sliding can improve the
equivalent dose results' accuracy but needs a significant curvature in
the IR-RF decay to work properly. Vertical sliding can be deactivated by
setting <monospace>vslide_range = NULL</monospace> or removing the parameter. The
function <monospace>plot_ROI()</monospace> displays and returns the ROI locations and
returns the Euclidean distance between them. This information is useful
to study the impact of signal cross-talk.</p>
</sec>
<?pagebreak page307?><sec id="Ch1.S2.SS7">
  <label>2.7</label><title>Signal cross-talk</title>
      <p id="d1e2312">An issue in OSL and TL imaging flagged by
<xref ref-type="bibr" rid="bib1.bibx28" id="text.54"/> and further discussed by
<xref ref-type="bibr" rid="bib1.bibx10" id="text.55"/> is signal cross-talk. Two independent
effects cause signal cross-talk: (1) signal light misdirected by optical
aberrations and (2) signal light backscattered by the silicone fixation
layers and the sample carrier's surface. The visual perceptions are
blurry luminescence images and signal halos around individual grains.
These halos can extend into the ROIs of other grains located nearby. This
cross-talk effect blends the IR-RF curves and potentially narrows the
<inline-formula><mml:math id="M107" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> distribution.</p>
      <p id="d1e2332"><xref ref-type="bibr" rid="bib1.bibx28" id="text.56"/> investigated the effects of
signal-cross talk in spatially resolved OSL measurements. They found a
substantial effect on the equivalent dose outcome and supposed optical
aberrations as the primary signal cross-talk source. Like us, they used
a lexsyg research device equipped with a ProEM512B camera.
However, they measured at the OSL/TL sample position equipped with a
custom-made multi-purpose optic
<xref ref-type="bibr" rid="bib1.bibx54 bib1.bibx27" id="paren.57"/>. The OSL/TL
optic was designed with large opening angles and high UV-to-NIR
transmittance. This design decision enabled a maximum of signal yield
for various applications but counteracted the optical correction of
spherical and chromatic aberration and their secondary effects like
astigmatism.</p>
      <p id="d1e2340">The optic of the RF position has a far smaller aperture
(NA<inline-formula><mml:math id="M108" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mi mathvariant="normal">RF</mml:mi></mml:msub><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:math></inline-formula> vs. NA<inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mrow><mml:mi mathvariant="normal">OSL</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">TL</mml:mi></mml:mrow></mml:msub><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula>) and therefore less spherical aberration. In addition,
we consider chromatic aberration as negligible because we performed the
focus calibration and all measurements at the same wavelength
(865 nm). As Fig. <xref ref-type="fig" rid="Ch1.F4"/> shows, the effect of signal
cross-talk appears to be weaker in our measurements as observed by
<xref ref-type="bibr" rid="bib1.bibx28" id="text.58"/> and should be insignificant for
inter-grain distances above ca. 500 <inline-formula><mml:math id="M110" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m. We tried to maintain
this distance by preparing our samples with a very low grain density.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><?xmltex \currentcnt{4}?><?xmltex \def\figurename{Figure}?><label>Figure 4</label><caption><p id="d1e2392">IR-RF cross-talk profile of one single grain. The inset shows the ImageJ image with the rectangle area selected for the profiling over ca. 1800 Gy (along the all image slices of the image stack). The solid black lines show the IR-RF signal. For illustrative reasons, we show only a few curves. The dashed blue line shows the approximated OSL cross-talk profile recorded by <xref ref-type="bibr" rid="bib1.bibx28" id="text.59"/> after a dose of ca. 100 Gy. The violet shaded area approximates the grain (not in height but width). Please note that the data by <xref ref-type="bibr" rid="bib1.bibx28" id="text.60"/> were only added to provide a rough qualitative comparison. Please note that the metric distances (sub-labels) refer to the chip surface.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://gchron.copernicus.org/articles/3/299/2021/gchron-3-299-2021-f04.png"/>

        </fig>

      <p id="d1e2407">Nevertheless, for samples with a high grain density or a high grain
intensity inhomogeneity, signal cross-talk will be an issue. We propose
the following countermeasures to reduce the effect; none of them applied
in our experiments though:
<list list-type="bullet"><list-item>
      <p id="d1e2412">Use special sample carriers (punched, black or polished) to minimise backscattered luminescence light.</p></list-item><list-item>
      <p id="d1e2416">Deploy improved optics (the lenses are exchangeable) to further reduce spherical aberration.</p></list-item><list-item>
      <p id="d1e2420">Apply mathematical correction methods <xref ref-type="bibr" rid="bib1.bibx10" id="paren.61"><named-content content-type="pre">e.g.</named-content></xref> to improve the grain separation in the data.</p></list-item></list></p><?xmltex \hack{\newpage}?>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Part II: testing spatially resolved radiofluorescence</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Samples</title>
      <p id="d1e2445">We selected two potassium-bearing (K-feldspar) samples to apply and test
our SR IR-RF tools and their settings. The first sample (TH0, grain
size: 125–250 <inline-formula><mml:math id="M111" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m) is a modern analogue sample of aeolian
origin from Sebkha Tah in Morocco <xref ref-type="bibr" rid="bib1.bibx6" id="paren.62"><named-content content-type="pre">cf.</named-content></xref>. It is
the same sample used by <xref ref-type="bibr" rid="bib1.bibx22" id="text.63"/> to calibrate the
<inline-formula><mml:math id="M112" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">90</mml:mn></mml:msup></mml:math></inline-formula>Sr <inline-formula><mml:math id="M113" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M114" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">90</mml:mn></mml:msup></mml:math></inline-formula>Y source of the very same
reader used for our measurements here. The sample was exposed to a
<inline-formula><mml:math id="M115" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula> dose of 56.02 Gy (<inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi>v</mml:mi></mml:msub><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> %)
in 2015 <xref ref-type="bibr" rid="bib1.bibx22" id="paren.64"/>. The second K-feldspar sample
(BDX16651, grain size: 100–200 <inline-formula><mml:math id="M117" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m) originates from a coastal
dune in the Médoc area (south-western France). For this sample,
<xref ref-type="bibr" rid="bib1.bibx42" id="text.65"/> estimated a palaeodose of <inline-formula><mml:math id="M118" display="inline"><mml:mrow><mml:mn mathvariant="normal">50.7</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5.7</mml:mn></mml:mrow></mml:math></inline-formula> Gy
for the quartz fraction (green OSL) and <inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:mn mathvariant="normal">96.2</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">8.0</mml:mn></mml:mrow></mml:math></inline-formula> Gy (with
IR-RF) for the K-feldspar fraction measured here. For details on the
sample preparation procedures, we refer to the cited literature.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Experiments</title>
      <p id="d1e2559">TH0 allowed us to calibrate the
<inline-formula><mml:math id="M120" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">90</mml:mn></mml:msup></mml:math></inline-formula>Sr <inline-formula><mml:math id="M121" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M122" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">90</mml:mn></mml:msup></mml:math></inline-formula>Y source with SR IR-RF and
compare the results with the PMT's calibration measurements. For this
experiment, the detector changed in alternating turns; i.e. after
measuring an aliquot with the PMT, another aliquot was measured using
the EM-CCD camera, and then we measured an aliquot again with the PMT,
and so on. We tested whether both measurements estimate statistically
indistinguishable source dose rates.</p>
      <p id="d1e2587">The measurements of BDX16651 aimed at one main application of single-grain measurements: differentiation between grain fractions with
different bleaching history. <xref ref-type="bibr" rid="bib1.bibx42" id="text.66"/> reported an age of
<inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:mn mathvariant="normal">37.0</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">4.9</mml:mn></mml:mrow></mml:math></inline-formula> ka (arithmetic average <inline-formula><mml:math id="M124" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> standard deviation)
for the feldspar fraction (measured with IR-RF) and
<inline-formula><mml:math id="M125" display="inline"><mml:mrow><mml:mn mathvariant="normal">26.1</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.5</mml:mn></mml:mrow></mml:math></inline-formula> ka for the quartz fraction (measured with green
OSL). While both ages overlap within 2<inline-formula><mml:math id="M126" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>, <xref ref-type="bibr" rid="bib1.bibx42" id="text.67"/>
reported consistently older ages for the feldspar fraction compared to
the quartz fraction for all samples from the site. Therefore, they
argued that the natural bleaching was likely insufficient to reset the
IR-RF signal of the feldspar grains. SR IR-RF should confirm the quartz
result obtained by <xref ref-type="bibr" rid="bib1.bibx42" id="text.68"/> and potentially enable us to
identify those grains that received a full signal resetting before the
last burial.</p>
      <?pagebreak page308?><p id="d1e2638">For both samples, feldspar grains were dispersed randomly on
stainless-steel cups aiming at a low grain density. The sample cups were
sprayed with a thin layer of silicon oil. However, no mask or other aid
was used because this reflects a more realistic aliquot preparation
procedure in most laboratories. We aimed at 30 to 50 grains per aliquot.
We prepared at least three cups per sample. Irradiation times were equal
to values reported in <xref ref-type="bibr" rid="bib1.bibx22" id="text.69"/> and
<xref ref-type="bibr" rid="bib1.bibx42" id="text.70"/>: 3600 s (RF<inline-formula><mml:math id="M127" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula>) and
30 000 s (RF<inline-formula><mml:math id="M128" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula>) for sample TH0; 3600 s and
10 000 s for sample BDX16651.</p>
      <p id="d1e2665">Figure <xref ref-type="fig" rid="Ch1.F5"/> shows typical IR-RF curves from one ROI (in
our case one grain) for TH0 (Fig. <xref ref-type="fig" rid="Ch1.F5"/>a) and BDX16651
(Fig. <xref ref-type="fig" rid="Ch1.F5"/>b). To obtain the <inline-formula><mml:math id="M129" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>s, we applied the vertical
and horizontal sliding technique <xref ref-type="bibr" rid="bib1.bibx50" id="paren.71"/> to TH0. The
vertical sliding ensures that both curves (RF<inline-formula><mml:math id="M130" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula> and
RF<inline-formula><mml:math id="M131" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula>) match best based on their shape. This approach was first
used by <xref ref-type="bibr" rid="bib1.bibx41" id="text.72"/> to corrected for changed signal
intensities due to geometry issues. Still, it can also be used to
correct sensitivity changes <xref ref-type="bibr" rid="bib1.bibx50" id="paren.73"/>. For sample
BDX16651, only horizontal sliding was used due to the absence of visible
curvature in the IR-RF curve.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><?xmltex \def\figurename{Figure}?><label>Figure 5</label><caption><p id="d1e2716">Typical IR-RF curves for the samples TH0 <bold>(a)</bold> and BDX16651 <bold>(b)</bold>. Both curves were extracted from ROIs following the procedure outlined in the first part of the article. For determining the <inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> the sliding method was used. Due to the absence of any curvature in the observed dose range, no vertical sliding was applied to sample BDX16651 measurements <bold>(b)</bold>. Please note, for sample BDX16651 only the first 8000 s of the RF<inline-formula><mml:math id="M133" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula> are displayed in the figure due to a technical error.  <monospace>SR-RF</monospace> macro settings as follows: image group size: 5, noise tolerance: 20 (TH0), 30 (BDX16651), grain diameter: 7 px.</p></caption>
          <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://gchron.copernicus.org/articles/3/299/2021/gchron-3-299-2021-f05.png"/>

        </fig>

      <p id="d1e2758">As rejection criteria, we applied the default test criteria
(cf. <xref ref-type="bibr" rid="bib1.bibx22" id="altparen.74"/>, their supplement) of the function
<monospace>analyse_IRSAR.RF()</monospace>. Two of those criteria were of relevance
for our contribution: <monospace>curves_ratio</monospace> and
<monospace>curves_bounds</monospace>. The first calculates the ratio of RF<inline-formula><mml:math id="M134" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula>
over RF<inline-formula><mml:math id="M135" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula> in the range of RF<inline-formula><mml:math id="M136" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula>. If it exceeds a certain
threshold (here 1.001), it usually indicates that the RF<inline-formula><mml:math id="M137" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula> best
matched the RF<inline-formula><mml:math id="M138" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula> while lying above the RF<inline-formula><mml:math id="M139" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula>
(additionally confirmed by visual inspection), violating the assumption
that the highest IR-RF signal is observed for the RF<inline-formula><mml:math id="M140" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula> after
bleaching. If the second, <monospace>curves_bounds</monospace>, criterion is flagged,
the RF<inline-formula><mml:math id="M141" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula> cannot match the RF<inline-formula><mml:math id="M142" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula> within the measured range
of RF<inline-formula><mml:math id="M143" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula> – an observation usually made for very noisy, flat
curves.</p>
      <p id="d1e2868">The raw data of our measurements, along with the applied R scripts and
partially pre-processed examples, are available open-access
<xref ref-type="bibr" rid="bib1.bibx39" id="paren.75"/>.</p>
</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Technical camera issues</title>
      <p id="d1e2882">While we measured at least three cups with grains per sample, the number
of usable cups presentable here finally narrowed down to one cup each. A
malfunction in the cooling system of our camera stopped us from
conducting more measurements. This cooling system degraded over the last
5 years, continually increasing the lowest reachable temperature from
at least <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">70</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M145" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C in 2015 to about <inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">45</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M147" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C in
2019. As we already mentioned above, the CCD chip temperature's spatial
and temporal uniformity is necessary to ensure a stable and homogeneous
signal background. We provide additional insights in
Appendix <xref ref-type="sec" rid="App1.Ch1.S1.SS2"/> and Figs. S1 and S2 in the
Supplement. Unfortunately, our camera's cooling system finally lost its
ability to maintain stable chip temperatures during our measurements
meant for publication. Significant variations in the IR-RF curves'
signal background required<?pagebreak page309?> us to discard most of our measurements (see
Fig. S4 for an example).</p>
      <p id="d1e2925">Independently from this issue, we further discarded grains located at
the rim of the stainless-steel cup, where our analysis indicated
exceeded IR-RF curve boundaries for unknown reasons (i.e. no match
between RF<inline-formula><mml:math id="M148" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula> and RF<inline-formula><mml:math id="M149" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula>).</p>
</sec>
<sec id="Ch1.S3.SS4">
  <label>3.4</label><title>Results</title>
      <p id="d1e2954">Figure <xref ref-type="fig" rid="Ch1.F6"/> illustrates the final results for the two
remaining cups: one for TH0 (Fig. <xref ref-type="fig" rid="Ch1.F6"/>a, upper part) and one
for BDX16651 (Fig. <xref ref-type="fig" rid="Ch1.F6"/>b, lower part). For each sample, we show
an image taken with the camera (left-hand side) during the measurements
and an Abanico plot <xref ref-type="bibr" rid="bib1.bibx11" id="paren.76"/> of the distribution of the
results. ROI pixels (diameter 7 px; see Table <xref ref-type="table" rid="Ch1.T4"/>)
taken for the <inline-formula><mml:math id="M150" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> analysis are coloured green and numbered. The
numbers are displayed again in the Abanico plots (right-hand side). The
results of TH0 display dose rates in Gy s<inline-formula><mml:math id="M151" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and equivalent
doses in Gy for BDX16651. We applied the average dose model
<xref ref-type="bibr" rid="bib1.bibx29" id="paren.77"/> to both distributions with an assumed intrinsic
overdispersion (<inline-formula><mml:math id="M152" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>m</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) of 0.05.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><?xmltex \currentcnt{6}?><?xmltex \def\figurename{Figure}?><label>Figure 6</label><caption><p id="d1e3008">The figure shows the SR IR-RF measurement results for single grains from samples TH0 <bold>(a)</bold> and BDX16651 <bold>(b)</bold>. For each sample, the image of one aliquot with the selected ROIs (green) is plotted on the left-hand side, and the resulting <inline-formula><mml:math id="M153" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> distribution as Abanico plot <xref ref-type="bibr" rid="bib1.bibx11" id="paren.78"/> on the righthand side. Numbers (white) in the plots identify individual ROIs. The distribution for TH0 shows dose rates and the distribution for BDX16651 equivalent doses. Note: the original images returned by the <monospace>SR-RF</monospace> macro have been cropped and reworked in R for this publication.</p></caption>
          <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://gchron.copernicus.org/articles/3/299/2021/gchron-3-299-2021-f06.png"/>

        </fig>

<sec id="Ch1.S3.SS4.SSS1">
  <label>3.4.1</label><title>TH0</title>
      <p id="d1e3047">SR RF-RF measurements of sample TH0 on 10 grains (ca. 20 grains on the
cup, 11 grains emitted sufficient light for the analysis, 1 grain
discarded) obtained a source-dose rate of
<inline-formula><mml:math id="M154" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.055</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.004</mml:mn></mml:mrow></mml:math></inline-formula> Gy s<inline-formula><mml:math id="M155" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (date: 13 September 2019). This value is
consistent with the source-dose rate calibration value obtained through
conventional IR-RF PMT measurements with the same sample (Fig. S5,
measurement date: 13 September 2019, <inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula>,
<inline-formula><mml:math id="M157" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.056</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.001</mml:mn></mml:mrow></mml:math></inline-formula> Gy s<inline-formula><mml:math id="M158" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). Hence, it confirms our hypothesis
that the calibration results obtained through SR IR-RF and IR-RF PMT
measurements are indistinguishable. Furthermore, it gives some
confidence that these measurements were not affected by the
cooling-system malfunction of the camera.</p>
      <p id="d1e3110">We further tried to determine to what extent the results depend on
the chosen ROI size (here diameter 7 px) and the interpolation
method used to correct the image for translation and rotation
(Sect. <xref ref-type="sec" rid="Ch1.S2.SS5.SSS2"/>). As an interpolation method, we obtained
the best results for the option <monospace>bicubic</monospace> (see Fig. S3), which is
the default in the <monospace>SR-RF</monospace> ImageJ macro <monospace>SR-RF</monospace>. The ROI
diameter should mimic the approximated grain size or be a bit larger
(see also Fig. S3). We observed a plateau of results for ROI sizes
between 5 and 10 px for sample TH0. Smaller values
should not be selected because the ROI finding algorithm may not
reliably select the grain centre. For larger values, signal cross-talk
effects likely become an issue, although the median appears to be rather
robust for all ROI sizes between 5 and 30 px for
<monospace>bicubic</monospace> (Fig. S3).</p>
</sec>
<sec id="Ch1.S3.SS4.SSS2">
  <label>3.4.2</label><title>BDX16651</title>
      <?pagebreak page310?><p id="d1e3136">We counted ca. 40 grains on the analysed cup, and 35 emitted light and
were analysed. We discarded three grains because the R analysis
indicated a bad match of RF<inline-formula><mml:math id="M159" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">nat</mml:mi></mml:msub></mml:math></inline-formula> and RF<inline-formula><mml:math id="M160" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">reg</mml:mi></mml:msub></mml:math></inline-formula>. The sample shows
a large <inline-formula><mml:math id="M161" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> scatter with an average <inline-formula><mml:math id="M162" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> of
<inline-formula><mml:math id="M163" display="inline"><mml:mrow><mml:mn mathvariant="normal">148.6</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">6.7</mml:mn></mml:mrow></mml:math></inline-formula> Gy (average dose and associated standard error
(SE)). This value is significantly larger than the mean <inline-formula><mml:math id="M164" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> of
ca. 96 Gy reported by <xref ref-type="bibr" rid="bib1.bibx42" id="text.79"/>. However, in
contrast to the study by <xref ref-type="bibr" rid="bib1.bibx42" id="text.80"/>, the single-grain data
allow further statistical treatment of the results. We applied the
finite mixture model <xref ref-type="bibr" rid="bib1.bibx23" id="paren.81"><named-content content-type="pre">FMM, cf.</named-content></xref> using the
function <monospace>calc_FiniteMixture()</monospace> with an assumed
<monospace>sigmab</monospace> value of 0.05 (Fig. <xref ref-type="fig" rid="Ch1.F7"/>). The Bayesian
information criterion indicated the statistically significant number of
components.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><?xmltex \currentcnt{7}?><?xmltex \def\figurename{Figure}?><label>Figure 7</label><caption><p id="d1e3225">Abanico plot for sample BDX16651 with coloured polygons indicating dose components as identified by the finite mixture model. Further details see main text.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gchron.copernicus.org/articles/3/299/2021/gchron-3-299-2021-f07.png"/>

          </fig>

      <p id="d1e3234">We found that four-dose components can best describe the <inline-formula><mml:math id="M165" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
distribution. The lowest ca. 81 Gy (blue colour, Fig. <xref ref-type="fig" rid="Ch1.F7"/>) contains only 10 % of all grains, the
second component ca. 26 %, the third
ca. 47 % and the highest dose component ca. 19 % of all grains. The number
varies with <monospace>sigmab</monospace> (not shown), but the data set seems to
consist of at least two dose groups (around <inline-formula><mml:math id="M166" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">120</mml:mn></mml:mrow></mml:math></inline-formula> Gy and
<inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">120</mml:mn></mml:mrow></mml:math></inline-formula> Gy). Assuming that the lowest dose group (Fig. <xref ref-type="fig" rid="Ch1.F7"/>) corresponds to the best bleached grains (leaving aside
possible layer disturbance and dose rate heterogeneities) the <inline-formula><mml:math id="M168" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> of
<inline-formula><mml:math id="M169" display="inline"><mml:mrow><mml:mn mathvariant="normal">81.3</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.4</mml:mn></mml:mrow></mml:math></inline-formula> Gy corresponds to an IR-RF age of
ca. <inline-formula><mml:math id="M170" display="inline"><mml:mrow><mml:mn mathvariant="normal">31</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> ka, this is more consistent with the quartz age of
<inline-formula><mml:math id="M171" display="inline"><mml:mrow><mml:mn mathvariant="normal">26.1</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.5</mml:mn></mml:mrow></mml:math></inline-formula> ka. However, the overall statistical confidence
in ages based on three grains might be doubted, regardless of the
statistically justified number of components. Simultaneously, it appears
that dose groups with higher doses than reported by
<xref ref-type="bibr" rid="bib1.bibx42" id="text.82"/> are dominant. Here more measurements would be
needed to infer a statistically robust answer.</p>
</sec>
</sec>
</sec>
<?pagebreak page311?><sec id="Ch1.S4">
  <label>4</label><title>Discussion</title>
      <p id="d1e3336">We showed that <monospace>SR-RF</monospace> is technically feasible and presented first
results. However, some aspects deserve critical consideration.</p>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>The technical dimension</title>
      <p id="d1e3349">It would be wishful thinking to assume that the work is finished. In
comparison to PMT measurements, the number of control parameters exploded similarly to the amount of data. We tried to reduce the
complexity by recommending meaningful settings and limit the number of
adjustable parameters to a minimum. Still, other systems might have
options we did not consider in our contribution.</p>
      <p id="d1e3352">Besides the technical problem we encountered with the detection chip's
cooling system, we also acknowledge that our system is not perfect. A
considerable improvement of image quality can be expected from a
dedicated RF imaging system. We outline a possible design for such a
system in Fig. <xref ref-type="fig" rid="Ch1.F8"/>. A system of one or two concave
mirrors would allow the relocation of the camera and the filters further away
from the <inline-formula><mml:math id="M172" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> source and thus minimise bremsstrahlung effects and
potential filter degradation <xref ref-type="bibr" rid="bib1.bibx30" id="paren.83"><named-content content-type="pre">cf.</named-content></xref>. Such a mirror
optic would also eliminate chromatic aberration and thus enable the
ability to take RF images at different wavelengths without refocusing. A
dedicated RF optic would also address further optical aberrations and
thus reduce signal cross-talk. As a camera, we propose a modern
scientific CMOS camera. CMOS cameras have lower readout noise than
traditional CCD cameras, although they do not support EM and hardware
pixel binning.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8"><?xmltex \currentcnt{8}?><?xmltex \def\figurename{Figure}?><label>Figure 8</label><caption><p id="d1e3371">Instrumental design proposal for a dedicated <monospace>SR-RF</monospace> reader based on a Freiberg Instruments lexsyg research.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gchron.copernicus.org/articles/3/299/2021/gchron-3-299-2021-f08.png"/>

        </fig>

      <p id="d1e3384">Concerning the software, one subject for future improvements we did not
implement is an advanced median filter in the image-processing macro.
While the current algorithm proved itself powerful in sufficiently
removing speckle noise, it decreases the time resolution and deletes
those pixel values which are not identified as median values. More
sophisticated algorithms deploy complex running median processes. For
example, the (53H, twice) algorithm described in
<xref ref-type="bibr" rid="bib1.bibx62" id="text.84"/> would mostly maintain time resolution
while being still as potent in removing spikes. As another example, the
(4253H, twice) algorithm of <xref ref-type="bibr" rid="bib1.bibx62" id="text.85"/> would maintain
the shape of the underlying RF curve while smoothing away signal spikes
and much of the Gaussian noise.</p>
      <p id="d1e3393">Another subject of potential improvement is the ROI assignment
algorithm. The current algorithm assigns the maximum signal pixel of the
grain as the centre of the ROI, no matter if this is the middle of the
grain. We suggest a subsequent algorithm which refines the ROI centre
towards an estimated grain centre. Consequently, the ROI size could be
reduced without losing signal, usually leading to higher inter-aliquot
scatter. This would increase grain separation and decrease any
influence of signal cross-talk.</p>
      <p id="d1e3396">Finally, while the presented software toolchain is open-source, hence
freely available and open to inspections and improvements, we
acknowledge that the combination of three different software tools adds
an additional layer of complexity. However, in particular, the image
processing through ImageJ has the advantage that the data
processing is transparent and available on all platforms and independent
of the particular measurement system. Furthermore, users can tap into an
extensive repository of available functions and plug-ins to record their
own macros and thus adjust the image analysis with ImageJ without
a need for programming skills.</p>
</sec>
<?pagebreak page312?><sec id="Ch1.S4.SS2">
  <label>4.2</label><title>The application dimension</title>
      <p id="d1e3407">This section alludes to the scientific gain and the initially expressed
hypothesis that SR IR-RF can unravel the bleaching history of single
feldspar grains.</p>
      <p id="d1e3410">We showed for sample TH0 that obtained source dose-rate results do not
differ significantly from conventional IR-RF results using a PMT. This
observation is reassuring because it shows that the presented workflow
and analysis leads to meaningful results. However,
Fig. <xref ref-type="fig" rid="Ch1.F6"/>a also reveals a large scatter between the
individual feldspar grains ranging from 0.044 to
0.076 Gy s<inline-formula><mml:math id="M173" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. <xref ref-type="bibr" rid="bib1.bibx53" id="text.86"/> reported a
variation of the radiation field for our source type of only 2 %. Hence,
the extreme values might result from microdosimetric effects
<xref ref-type="bibr" rid="bib1.bibx47" id="paren.87"><named-content content-type="pre">irradiation, cf.</named-content></xref>, which are related to IR-RF
characteristics of single feldspar grains or varying K concentrations
<xref ref-type="bibr" rid="bib1.bibx16" id="paren.88"><named-content content-type="pre">e.g.</named-content></xref>.</p>
      <p id="d1e3440"><xref ref-type="bibr" rid="bib1.bibx44" id="text.89"/> reported zoning of feldspar grains linked to the
geochemical composition. On some of our images (not shown), it appears
that the light is not evenly distributed over the grain surface.
However, higher optical resolutions would be required to investigate
this aspect further.</p>
      <p id="d1e3445">Sample BDX16651 showed an even higher scatter in the equivalent doses,
which is not surprising for a natural sediment sample. While
environmental dose rate heterogeneities might add to the observed
scatter (Fig. <xref ref-type="fig" rid="Ch1.F6"/>b), the internal K concentration of
K-feldspar <xref ref-type="bibr" rid="bib1.bibx31" id="paren.90"><named-content content-type="pre">cf.</named-content></xref>, in our case contributing
ca. 23 % to the environmental dose rate <xref ref-type="bibr" rid="bib1.bibx42" id="paren.91"><named-content content-type="pre">cf.</named-content></xref>,
weakens the effect. Grain-to-grain variations in the internal
K concentrations would undoubtedly broaden the <inline-formula><mml:math id="M174" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> distribution.
However, in our case, the K concentration was sufficiently constrained
by energy dispersive X-ray analysis (EDX) <xref ref-type="bibr" rid="bib1.bibx42" id="paren.92"><named-content content-type="post">their Fig. S16</named-content></xref> at <inline-formula><mml:math id="M175" display="inline"><mml:mrow><mml:mn mathvariant="normal">11.4</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.5</mml:mn></mml:mrow></mml:math></inline-formula> %<fn id="Ch1.Footn3"><p id="d1e3489">This value was re-calculated for sample BDX16651 using the original data from <xref ref-type="bibr" rid="bib1.bibx42" id="text.93"/> but excluding K concentration values <inline-formula><mml:math id="M176" display="inline"><mml:mrow><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">14</mml:mn></mml:mrow></mml:math></inline-formula> %.</p></fn>.
This value does not have enough leverage to cause results, such as
observed for our sample. More important is to keep in mind that IR-RF
specifically targets K-feldspar grains, which is amplified by selecting
single grains with the highest luminescence intensities and presumed
relatively homogeneous K concentrations. Hence, it is more likely that
the distribution reflects different bleaching histories with a lower
<inline-formula><mml:math id="M177" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> component (Fig. <xref ref-type="fig" rid="Ch1.F7"/>) that gives a luminescence
more consistently than the quartz age.</p>
      <p id="d1e3520">The small number of overall observations, however, does not yet support
a more robust conclusion.</p>
      <p id="d1e3523">Unfortunately, the degraded camera cooling system stopped us from carrying out
additional experiments. Does this leave the question open of whether to
expect hidden malign effects in the results of samples TH0 and BDX16551?
Our observations indicated that cooling system problems were always
clearly visible in the IR-RF curves, manifesting in vastly overestimated
unrealistic results – an observation we did not make for the presented
results.</p>
      <p id="d1e3526">In the absence of such technical issues, given that our method can be
tested successfully at more extensive data sets, the next logical step
would be to link SR IR-RF with spectral measurements.
<xref ref-type="bibr" rid="bib1.bibx61" id="text.94"/> performed spectrally resolved
radiofluorescence measurements of single feldspar grains. They
demonstrated that the radioluminescence emission spectra could
significantly differ from grain to grain. They also showed that
plagioclase grains might also emit IR-RF signals and mentioned that the
separation of K-feldspar grains from other feldspar grains could not be
taken for granted. Nevertheless, <xref ref-type="bibr" rid="bib1.bibx61" id="text.95"/>
concluded that “good” grains and “bad” grains might be distinguishable
by their spectral fingerprint. In the same year,
<xref ref-type="bibr" rid="bib1.bibx37" id="text.96"/> showed that artificial
irradiation could stimulate an RF emission centred at 700 nm.
This additional emission may interfere with IR-RF measurements. However,
for the sample BDX16651, we performed brief tests with a spectrometer
and did not find any indication for a potential signal interference (not
shown, to be presented elsewhere).</p>
      <p id="d1e3538">Successive spatially resolved RF measurements at different wavelengths
are possible if the measurement device deploys an automated filter
wheel. In principle, it is even possible to rotate the filter wheel
during one measurement and take RF images of multiple wavelengths almost
simultaneously. Nevertheless, this would require a significant software
update. Still, the software framework presented in this paper may
provide the basis to analyse such measurements.</p>
      <p id="d1e3541"><xref ref-type="bibr" rid="bib1.bibx7" id="text.97"/> unsuccessfully searched for a
correlation between K concentration and the post-IR infrared stimulated luminescence (IRSL) <inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in
single grains of K-feldspar. Recently, <xref ref-type="bibr" rid="bib1.bibx44" id="text.98"/> reported a
correlation of the K concentration and the IR signal measured with
cathodoluminescence. Spatially resolved RF measurements in combination
with spatially resolved IRSL measurements may help to link both
observations.</p>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Conclusions</title>
      <p id="d1e3570">For the first time, we outlined technique and workflow for spatially
resolved infrared radiofluorescence (SR IR-RF). We presented the first
measurement results and a newly developed open-source software toolchain, applicable independent of manufacturer.</p>
      <p id="d1e3573">In contrast to routine PMT experiments, spatially resolved measurements
come with more degrees of freedom that need to be taken into account,
making first steps foremost a technical challenge. Our contribution
detailed relevant technical parameters of the imaging system and
provided application guidelines. This will allow other laboratories to
repeat our work and remove significant obstacles in applying this
promising method.</p>
      <p id="d1e3576">Tests on two K-feldspar samples showed results consistent with IR-RF
measurements with a photomultiplier tube (PMT) for the sample TH0.
However, our results also showed<?pagebreak page313?> a large grain-to-grain scatter,
requiring more attention and more future measurements. For the sample
BDX16651, we identified up to four different <inline-formula><mml:math id="M179" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> components, with
the lowest component resulting in an IR-RF age still older than the
corresponding quartz age. This finding may indicate that this particular
sample's bleaching time was insufficient to reset the natural IR-RF
signal during sediment transport. However, if insufficient resetting has
affected all K-feldspar grains, it cannot be resolved by spatially
resolved measurements, but it indicates the current limit of IR-RF due
to its slower signal bleachability compared to quartz.</p>
      <p id="d1e3590"><?xmltex \hack{\newpage}?>We faced several technical issues, foremost the unstable signal
background due to a camera defect. This observation demonstrates the
higher complexity and potentially more error-prone technical setup than
IR-RF measurements with a photomultiplier tube. Nevertheless, we are
confident that more measurements using fully functional systems can
exploit the presented method's full potential.</p><?xmltex \hack{\clearpage}?>
</sec>

      
      </body>
    <back><app-group>

<?pagebreak page314?><app id="App1.Ch1.S1">
  <?xmltex \currentcnt{A}?><label>Appendix A</label><title>Estimation of the signal-to-noise ratio from the camera settings</title>
<sec id="App1.Ch1.S1.SS1">
  <label>A1</label><title>Signal per pixel</title>
      <p id="d1e3613">If the signal shows no unsteadiness, inhomogeneity, non-linearity or any
background signal shape, the expected signal per image pixel
<inline-formula><mml:math id="M180" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mi mathvariant="normal">pixel</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (in photoelectrons e<inline-formula><mml:math id="M181" display="inline"><mml:msup><mml:mi/><mml:mo>-</mml:mo></mml:msup></mml:math></inline-formula>) after
background correction approximates to
            <disp-formula id="App1.Ch1.S1.E1" content-type="numbered"><label>A1</label><mml:math id="M182" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mi mathvariant="normal">pixel</mml:mi></mml:msub><mml:mo>≈</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">exposure</mml:mi></mml:msub><mml:msub><mml:mi>n</mml:mi><mml:mi mathvariant="normal">bin</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">pixel</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M183" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">pixel</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the rate of luminescence-related
photoelectrons generated in one CCD pixel in
e<inline-formula><mml:math id="M184" display="inline"><mml:msup><mml:mi/><mml:mo>-</mml:mo></mml:msup></mml:math></inline-formula>/px/s. We assume that <inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">pixel</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
depends linearly on the actual photon flux emitted by the sample by an
unknown constant. The other parameters are explained and discussed in
the following. Be aware that all signal and noise values in the
following use the unit photoelectrons per pixel e<inline-formula><mml:math id="M186" display="inline"><mml:msup><mml:mi/><mml:mo>-</mml:mo></mml:msup></mml:math></inline-formula>,
which is not equal to the unit counts per pixel displayed in the image
data. The conversion rate between photoelectrons and counts depends on
multiple camera settings and is of just minor relevance for the
signal-to-noise ratio (SNR) and therefore not discussed here. Be also
aware that if not stated otherwise, we always refer to image pixels and not
CCD pixels.</p>
      <p id="d1e3707">The <italic>binning factor</italic> <inline-formula><mml:math id="M187" display="inline"><mml:mrow><mml:msub><mml:mi>n</mml:mi><mml:mi mathvariant="normal">bin</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> expresses the number of CCD
pixels combined to one image pixel. Applying pixel binning improves the
signal-to-noise ratio, because the signal of the pixels is summed up,
but this signal is only affected by readout noise one time. The RF optic
of the lexsyg research system has a lateral magnification of
about <inline-formula><mml:math id="M188" display="inline"><mml:mrow><mml:mi>M</mml:mi><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">0.6</mml:mn></mml:mrow></mml:math></inline-formula>. The resulting spatial resolution is listed in
Table <xref ref-type="table" rid="App1.Ch1.S1.T5"/> (11/2018 @L2, IRAMAT-CRP2A).</p>

<?xmltex \floatpos{h!}?><table-wrap id="App1.Ch1.S1.T5"><?xmltex \currentcnt{A1}?><label>Table A1</label><caption><p id="d1e3741">Spatial resolution and binning factor dependent on pixel binning.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Binning</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:msub><mml:mi>n</mml:mi><mml:mi mathvariant="normal">bin</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">Spatial resolution</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">(<inline-formula><mml:math id="M190" display="inline"><mml:mrow><mml:mi>M</mml:mi><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">0.6</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">none</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M191" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">25</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M192" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M193" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">4</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M194" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">50</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M195" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M196" display="inline"><mml:mrow><mml:mn mathvariant="normal">4</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">16</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M197" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M198" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e3909">The image <italic>exposure time</italic> <inline-formula><mml:math id="M199" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">exposure</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (s) is user-defined.
It is reasonable to set the exposure time  depending on
the measurements channel time <inline-formula><mml:math id="M200" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">channel</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (s):
<list list-type="bullet"><list-item>
      <p id="d1e3939">sequential readout (<italic>full-frame mode</italic>): <inline-formula><mml:math id="M201" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">exposure</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">channel</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">dead</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></p></list-item><list-item>
      <p id="d1e3970">simultaneous readout (<italic>frame transfer mode</italic>): <inline-formula><mml:math id="M202" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">exposure</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">channel</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>.</p></list-item></list>
If the camera runs in full-frame mode, any luminescence signal and
trigger signal arriving during pixel shifting, pixel readout and data
transmission will be lost. This is the case for measurements achieved
with LexStudio 2 (11/2018 @L2, IRAMAT-CRP2A) and results in a
recommended camera dead time <inline-formula><mml:math id="M203" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">dead</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (s). Table <xref ref-type="table" rid="App1.Ch1.S1.T6"/>
shows tested and believed safe dead-time values. Within this time range,
the camera will have finished image readout and transmission. Shorter
dead times may work but likely lead to lost trigger signals and
therefore lost images. If the camera runs in frame transfer mode
(default mode for most scientific CCD imaging systems), the image
shifted into a special readout section on the CCD chip after the
exposure time ended. The image can be read out while the new exposure
can already begin (simultaneous readout). If the exposure time is longer
than the readout time (plus a little offset), no dead time is necessary.</p>

<?xmltex \floatpos{h!}?><table-wrap id="App1.Ch1.S1.T6"><?xmltex \currentcnt{A2}?><label>Table A2</label><caption><p id="d1e4012">Left: CCD readout time as returned by the camera software representing theoretical lowest dead time values.
Right: experimentally derived upper dead time limits (recommended settings). For the measurement the amplifier was run in
low noise mode and we used the default camera settings.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.99}[.99]?><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right" colsep="1"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry namest="col2" nameend="col4" align="center" colsep="1">Readout time </oasis:entry>
         <oasis:entry namest="col5" nameend="col7" align="center">Upper dead time </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" namest="col2" nameend="col4" align="center">[s] </oasis:entry>
         <oasis:entry rowsep="1" namest="col5" nameend="col7" align="center">[s] </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" namest="col2" nameend="col4" align="center" colsep="1">Binning </oasis:entry>
         <oasis:entry rowsep="1" namest="col5" nameend="col7" align="center">Binning </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Readout rate</oasis:entry>
         <oasis:entry colname="col2">none</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M204" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M205" display="inline"><mml:mrow><mml:mn mathvariant="normal">4</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">none</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M206" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M207" display="inline"><mml:mrow><mml:mn mathvariant="normal">4</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M208" display="inline"><mml:mn mathvariant="normal">100</mml:mn></mml:math></inline-formula> kHz</oasis:entry>
         <oasis:entry colname="col2">2.13</oasis:entry>
         <oasis:entry colname="col3">0.64</oasis:entry>
         <oasis:entry colname="col4">0.21</oasis:entry>
         <oasis:entry colname="col5">2.49</oasis:entry>
         <oasis:entry colname="col6">0.85</oasis:entry>
         <oasis:entry colname="col7">0.38</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M209" display="inline"><mml:mn mathvariant="normal">1</mml:mn></mml:math></inline-formula> MHz</oasis:entry>
         <oasis:entry colname="col2">0.29</oasis:entry>
         <oasis:entry colname="col3">0.08</oasis:entry>
         <oasis:entry colname="col4">0.03</oasis:entry>
         <oasis:entry colname="col5">0.47</oasis:entry>
         <oasis:entry colname="col6">0.24</oasis:entry>
         <oasis:entry colname="col7">0.18</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

</sec>
<sec id="App1.Ch1.S1.SS2">
  <label>A2</label><title>Noise per pixel</title>
      <p id="d1e4209">For each image pixel, we assume that the signal noise
(<inline-formula><mml:math id="M210" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">pixel</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) follows a normal distribution resulting from the
superimposition of three independent sources:
            <disp-formula id="App1.Ch1.S1.E2" content-type="numbered"><label>A2</label><mml:math id="M211" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">pixel</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">shot</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">dark</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">read</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:msqrt><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          The <italic>shot noise</italic> (<inline-formula><mml:math id="M212" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">shot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) is caused by the random
arrival of the photons and obeys Poisson statistics
<xref ref-type="bibr" rid="bib1.bibx34" id="paren.99"/>. This noise component is independent of
any camera parameter setting and only a function of the expected
luminescence signal given by the square root of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E1"/>).</p>
      <p id="d1e4285">The <italic>dark shot noise</italic> (<inline-formula><mml:math id="M213" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">dark</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) is the shot noise of
the dark current of the CCD:
            <disp-formula id="App1.Ch1.S1.E3" content-type="numbered"><label>A3</label><mml:math id="M214" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">dark</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">exposure</mml:mi></mml:msub><mml:msub><mml:mi>n</mml:mi><mml:mi mathvariant="normal">bin</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">dark</mml:mi></mml:msub></mml:mrow></mml:msqrt></mml:mrow></mml:math></disp-formula>
          The <italic>dark current signal</italic> <inline-formula><mml:math id="M215" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">dark</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is one of two sources
of camera-internal signal background (besides the ADC offset, which
contributes no significant noise). The dark current arises mainly from
thermally released charge carriers at the CCD surface and in the
depletion region <xref ref-type="bibr" rid="bib1.bibx34" id="paren.100"/>. The dark shot noise
is nearly exponentially dependent on the CCD temperature <inline-formula><mml:math id="M216" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">CCD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
(<inline-formula><mml:math id="M217" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C), and its value is characteristic to each individual
camera <xref ref-type="bibr" rid="bib1.bibx34" id="paren.101"><named-content content-type="pre">cf.</named-content></xref>.</p>
      <?pagebreak page315?><p id="d1e4375">As rule of thumb, reducing the CCD chip temperature by 10 K quarters the
dark current signal and halves the dark noise. The following estimation
formula is derived from the Certificate of Performance dark
charge calibration value of our camera (PI ProEM512B @L2, IRAMAT-CRP2A)
and multiple specifications sheets of similar cameras:
            <disp-formula id="App1.Ch1.S1.E4" content-type="numbered"><label>A4</label><mml:math id="M218" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">dark</mml:mi></mml:msub><mml:mo>≅</mml:mo><mml:mn mathvariant="normal">210</mml:mn><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mn mathvariant="normal">0.144</mml:mn><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">CCD</mml:mi></mml:msub></mml:mrow></mml:msup><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
      <p id="d1e4405">See Fig. S1 in the Supplement for a plot of that equation. The dark
current signal itself dissolves in the data analysis process. However,
the contribution of the dark shot noise in Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E2"/>) grows with
the binning factor, the exposure time and especially the CCD
temperature. The dark shot noise of the camera used in this contribution
is estimated in Table <xref ref-type="table" rid="App1.Ch1.S1.T7"/>.</p>

<?xmltex \floatpos{h!}?><table-wrap id="App1.Ch1.S1.T7"><?xmltex \currentcnt{A3}?><label>Table A3</label><caption><p id="d1e4416">Dark shot noise per image pixel estimation depending on exposure time,
binning factor and CCD temperature for an average Princeton Instruments ProEM512 camera.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.95}[.95]?><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right" colsep="1"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" namest="col2" nameend="col7" align="center">Estimated dark shot noise (e<inline-formula><mml:math id="M219" display="inline"><mml:msup><mml:mi/><mml:mo>-</mml:mo></mml:msup></mml:math></inline-formula>) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" namest="col2" nameend="col4" align="center" colsep="1"><inline-formula><mml:math id="M220" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">CCD</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">70</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M221" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C </oasis:entry>
         <oasis:entry rowsep="1" namest="col5" nameend="col7" align="center"><inline-formula><mml:math id="M222" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">CCD</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">45</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M223" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" namest="col2" nameend="col4" align="center" colsep="1">Binning </oasis:entry>
         <oasis:entry rowsep="1" namest="col5" nameend="col7" align="center">Binning </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Exposure time</oasis:entry>
         <oasis:entry colname="col2">none</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M224" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M225" display="inline"><mml:mrow><mml:mn mathvariant="normal">4</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">none</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M226" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M227" display="inline"><mml:mrow><mml:mn mathvariant="normal">4</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">0.5 s</oasis:entry>
         <oasis:entry colname="col2">0.1</oasis:entry>
         <oasis:entry colname="col3">0.1</oasis:entry>
         <oasis:entry colname="col4">0.3</oasis:entry>
         <oasis:entry colname="col5">0.4</oasis:entry>
         <oasis:entry colname="col6">0.8</oasis:entry>
         <oasis:entry colname="col7">1.6</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">1 s</oasis:entry>
         <oasis:entry colname="col2">0.1</oasis:entry>
         <oasis:entry colname="col3">0.2</oasis:entry>
         <oasis:entry colname="col4">0.4</oasis:entry>
         <oasis:entry colname="col5">0.6</oasis:entry>
         <oasis:entry colname="col6">1.1</oasis:entry>
         <oasis:entry colname="col7">2.3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">2 s</oasis:entry>
         <oasis:entry colname="col2">0.1</oasis:entry>
         <oasis:entry colname="col3">0.3</oasis:entry>
         <oasis:entry colname="col4">0.5</oasis:entry>
         <oasis:entry colname="col5">0.8</oasis:entry>
         <oasis:entry colname="col6">1.6</oasis:entry>
         <oasis:entry colname="col7">3.2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">5 s</oasis:entry>
         <oasis:entry colname="col2">0.2</oasis:entry>
         <oasis:entry colname="col3">0.4</oasis:entry>
         <oasis:entry colname="col4">0.8</oasis:entry>
         <oasis:entry colname="col5">1.3</oasis:entry>
         <oasis:entry colname="col6">2.5</oasis:entry>
         <oasis:entry colname="col7">5.1</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">10 s</oasis:entry>
         <oasis:entry colname="col2">0.3</oasis:entry>
         <oasis:entry colname="col3">0.6</oasis:entry>
         <oasis:entry colname="col4">1.2</oasis:entry>
         <oasis:entry colname="col5">1.8</oasis:entry>
         <oasis:entry colname="col6">3.6</oasis:entry>
         <oasis:entry colname="col7">7.2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">20 s</oasis:entry>
         <oasis:entry colname="col2">0.4</oasis:entry>
         <oasis:entry colname="col3">0.8</oasis:entry>
         <oasis:entry colname="col4">1.7</oasis:entry>
         <oasis:entry colname="col5">2.5</oasis:entry>
         <oasis:entry colname="col6">5.1</oasis:entry>
         <oasis:entry colname="col7">10.2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">40 s</oasis:entry>
         <oasis:entry colname="col2">0.6</oasis:entry>
         <oasis:entry colname="col3">1.2</oasis:entry>
         <oasis:entry colname="col4">2.4</oasis:entry>
         <oasis:entry colname="col5">3.6</oasis:entry>
         <oasis:entry colname="col6">7.2</oasis:entry>
         <oasis:entry colname="col7">14.4</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <p id="d1e4775">The <italic>readout noise</italic> <inline-formula><mml:math id="M228" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">read</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is a result of the register
readout. It is independent of the exposure time and the CCD temperature
and approximately independent from pixel binning. The readout noise
increases with increasing readout rate. For our camera and deploying the
available traditional amplifier readout modes, readout noise values are
listed in Table <xref ref-type="table" rid="App1.Ch1.S1.T8"/>.</p>

<?xmltex \floatpos{h!}?><table-wrap id="App1.Ch1.S1.T8"><?xmltex \currentcnt{A4}?><label>Table A4</label><caption><p id="d1e4797">Readout noise dependence of readout rate using the traditional
low noise amplifier. Values according to the <italic>Certificate of Performance</italic> of the PI ProEM512B camera at device L2, IRAMAT-CRP2A.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Readout rate</oasis:entry>
         <oasis:entry colname="col2">Readout noise [e<inline-formula><mml:math id="M229" display="inline"><mml:msup><mml:mi/><mml:mo>-</mml:mo></mml:msup></mml:math></inline-formula>]</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">100 kHz</oasis:entry>
         <oasis:entry colname="col2">3.3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">1 MHz</oasis:entry>
         <oasis:entry colname="col2">7.5</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">5 MHz</oasis:entry>
         <oasis:entry colname="col2">14.1</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e4863">Scientific CCD cameras of this type achieve usually a readout noise of
<inline-formula><mml:math id="M230" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula> e<inline-formula><mml:math id="M231" display="inline"><mml:msup><mml:mi/><mml:mo>-</mml:mo></mml:msup></mml:math></inline-formula> at 100 kHz and <inline-formula><mml:math id="M232" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> e<inline-formula><mml:math id="M233" display="inline"><mml:msup><mml:mi/><mml:mo>-</mml:mo></mml:msup></mml:math></inline-formula> at 1 MHz (as for 2018).</p>
      <p id="d1e4904">The <italic>signal-to-noise ratio</italic> (SNR) is a common quality marker for
measurement data. The SNR per image pixel is defined by
            <disp-formula id="App1.Ch1.S1.E5" content-type="numbered"><label>A5</label><mml:math id="M234" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="normal">SNR</mml:mi><mml:mi mathvariant="normal">pixel</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mi mathvariant="normal">pixel</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">pixel</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          Approximations of the signal per pixel <inline-formula><mml:math id="M235" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mi mathvariant="normal">pixel</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and the noise per
pixel <inline-formula><mml:math id="M236" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">pixel</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are given by Eqs. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E1"/>) and (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E2"/>).</p>
</sec>
<sec id="App1.Ch1.S1.SS3">
  <label>A3</label><title>Signal-to-noise ratio per grain</title>
      <p id="d1e4974">In terms of image processing, a grain is defined by its
region of interest (ROI). While the pixel SNR
(Eq. <xref ref-type="disp-formula" rid="App1.Ch1.S1.E5"/>) can help to optimise the camera settings, it does
not factor the size of the ROI in. It is reasonable to set the ROI
diameter about 50 % larger than the average grain diameter. With the
lateral magnification known (here <inline-formula><mml:math id="M237" display="inline"><mml:mrow><mml:mi>M</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.6</mml:mn></mml:mrow></mml:math></inline-formula>) and the CCD pixel size
known (here <inline-formula><mml:math id="M238" display="inline"><mml:mrow><mml:msub><mml:mi>d</mml:mi><mml:mi mathvariant="normal">pixel</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">16</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M239" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m), the grain size can be converted into
pixels and vice versa.</p>
      <p id="d1e5014">To approximate the SNR of a single-grain IR-RF signal dependent on
the ROI size, we assume that the signal remains on a steady level (no
decay) and that all signal light reaching the CCD is gathered in the
associated ROI (no light scattering). Then, the IR-RF
<italic>signal per grain</italic> (<inline-formula><mml:math id="M240" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mi mathvariant="normal">grain</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) depends just on the emitted
photon flux of the grain and the exposure time <inline-formula><mml:math id="M241" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">exposure</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>.
            <disp-formula id="App1.Ch1.S1.E6" content-type="numbered"><label>A6</label><mml:math id="M242" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mi mathvariant="normal">grain</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">exposure</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">grain</mml:mi></mml:msub></mml:mrow></mml:math></disp-formula>
          Here, <inline-formula><mml:math id="M243" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">grain</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the signal flux per grain (in
e<inline-formula><mml:math id="M244" display="inline"><mml:msup><mml:mi/><mml:mo>-</mml:mo></mml:msup></mml:math></inline-formula>/s) inside the ROI, which is proportional to the
emitted photon flux. The signal per pixel <inline-formula><mml:math id="M245" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mi mathvariant="normal">pixel</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
(Eq. <xref ref-type="disp-formula" rid="App1.Ch1.S1.E1"/>) for all ROI pixels adds up to the signal per grain
<inline-formula><mml:math id="M246" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mi mathvariant="normal">grain</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. We consider the distribution of <inline-formula><mml:math id="M247" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mi mathvariant="normal">pixel</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> inside
the ROI as unimportant.</p>
      <p id="d1e5121">While the grain signal <inline-formula><mml:math id="M248" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mi mathvariant="normal">grain</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is independent on all parameters
but the exposure time, the signal noise per grain
<inline-formula><mml:math id="M249" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">grain</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> depends also on the ROI size <inline-formula><mml:math id="M250" display="inline"><mml:mrow><mml:msub><mml:mi>n</mml:mi><mml:mi mathvariant="normal">ROI</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and the
camera settings:
            <disp-formula id="App1.Ch1.S1.E7" content-type="numbered"><label>A7</label><mml:math id="M251" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">grain</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mi mathvariant="normal">grain</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>n</mml:mi><mml:mi mathvariant="normal">ROI</mml:mi></mml:msub><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">dark</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:msub><mml:mi>n</mml:mi><mml:mi mathvariant="normal">ROI</mml:mi></mml:msub><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">read</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:msqrt><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          Thus, the single-grain radiofluorescence signal-to-noise ratio
SNR<inline-formula><mml:math id="M252" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">grain</mml:mi></mml:msub></mml:math></inline-formula> can be approximated by
            <disp-formula id="App1.Ch1.S1.E8" content-type="numbered"><label>A8</label><mml:math id="M253" display="block"><mml:mrow><?xmltex \hack{\hbox\bgroup\fontsize{7.9}{7.9}\selectfont$\displaystyle}?><mml:msub><mml:mi mathvariant="normal">SNR</mml:mi><mml:mi mathvariant="normal">grain</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">exposure</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">grain</mml:mi></mml:msub></mml:mrow><mml:msqrt><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">exposure</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">grain</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>n</mml:mi><mml:mi mathvariant="normal">ROI</mml:mi></mml:msub><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">exposure</mml:mi></mml:msub><mml:msub><mml:mi>n</mml:mi><mml:mi mathvariant="normal">bin</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">dark</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>n</mml:mi><mml:mi mathvariant="normal">ROI</mml:mi></mml:msub><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">read</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:msqrt></mml:mfrac></mml:mstyle><?xmltex \hack{$\egroup}?><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          Here, <inline-formula><mml:math id="M254" display="inline"><mml:mrow><mml:msub><mml:mi>n</mml:mi><mml:mi mathvariant="normal">ROI</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the number of pixels in the ROI, available in the
<monospace>table.rf</monospace> file. The signal per grain <inline-formula><mml:math id="M255" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">grain</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> has to be
user-defined and can be considered as the same order of magnitude as the
counts per second a grain would contribute to PMT measurements. We
defined an arbitrary dim grain and estimated SNR<inline-formula><mml:math id="M256" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">grain</mml:mi></mml:msub></mml:math></inline-formula> for
different camera settings in Table <xref ref-type="table" rid="App1.Ch1.S1.T9"/>. We consider a SNR
of at least SNR<inline-formula><mml:math id="M257" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mi mathvariant="normal">grain</mml:mi></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula> as necessary to enable sufficiently
precise single-grain dating.</p>

<?xmltex \floatpos{h!}?><table-wrap id="App1.Ch1.S1.T9"><?xmltex \hack{\hsize\textwidth}?><?xmltex \currentcnt{A5}?><label>Table A5</label><caption><p id="d1e5351">Decision table for best binning and channel time settings. We compare the system
used in our study and a (hypothetical) similar system with comparable new camera and improved control software. Bold SNR values are related to the <italic>high SNR</italic> camera settings, recommend in Table <xref ref-type="table" rid="Ch1.T3"/>.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="8">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:colspec colnum="7" colname="col7" align="left"/>
     <oasis:colspec colnum="8" colname="col8" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col2" align="center" colsep="1">Grain settings </oasis:entry>
         <oasis:entry namest="col3" nameend="col5" align="center" colsep="1">lexsyg L2 IRAMAT-CRP2A </oasis:entry>
         <oasis:entry namest="col6" nameend="col8" align="center">Improved system </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry namest="col1" nameend="col2" align="center" colsep="1"><inline-formula><mml:math id="M261" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">grain</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/></mml:mrow></mml:math></inline-formula>e<inline-formula><mml:math id="M262" display="inline"><mml:msup><mml:mi/><mml:mo>-</mml:mo></mml:msup></mml:math></inline-formula>s<inline-formula><mml:math id="M263" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry namest="col3" nameend="col5" align="center" colsep="1"><inline-formula><mml:math id="M264" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">read</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">3.3</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/></mml:mrow></mml:math></inline-formula>e<inline-formula><mml:math id="M265" display="inline"><mml:msup><mml:mi/><mml:mo>-</mml:mo></mml:msup></mml:math></inline-formula> (7.5 e<inline-formula><mml:math id="M266" display="inline"><mml:msup><mml:mi/><mml:mo>-</mml:mo></mml:msup></mml:math></inline-formula>)<inline-formula><mml:math id="M267" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry namest="col6" nameend="col8" align="center"><inline-formula><mml:math id="M268" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">read</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/></mml:mrow></mml:math></inline-formula>e<inline-formula><mml:math id="M269" display="inline"><mml:msup><mml:mi/><mml:mo>-</mml:mo></mml:msup></mml:math></inline-formula> (5 e<inline-formula><mml:math id="M270" display="inline"><mml:msup><mml:mi/><mml:mo>-</mml:mo></mml:msup></mml:math></inline-formula>)<inline-formula><mml:math id="M271" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry namest="col1" nameend="col2" align="center" colsep="1"><inline-formula><mml:math id="M272" display="inline"><mml:mrow><mml:msub><mml:mi>d</mml:mi><mml:mi mathvariant="normal">grain</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">160</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M273" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m </oasis:entry>
         <oasis:entry namest="col3" nameend="col5" align="center" colsep="1"><inline-formula><mml:math id="M274" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">CCD</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">45</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M275" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C </oasis:entry>
         <oasis:entry namest="col6" nameend="col8" align="center"><inline-formula><mml:math id="M276" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">CCD</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">70</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M277" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col2" align="center" colsep="1"/>
         <oasis:entry namest="col3" nameend="col5" align="center" colsep="1">Sequential readout </oasis:entry>
         <oasis:entry namest="col6" nameend="col8" align="center">Simultaneous readout </oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Desired spatial resolution:</oasis:entry>
         <oasis:entry colname="col3">25 <inline-formula><mml:math id="M278" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m</oasis:entry>
         <oasis:entry colname="col4">50 <inline-formula><mml:math id="M279" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m</oasis:entry>
         <oasis:entry colname="col5">100 <inline-formula><mml:math id="M280" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m</oasis:entry>
         <oasis:entry colname="col6">25 <inline-formula><mml:math id="M281" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m</oasis:entry>
         <oasis:entry colname="col7">50 <inline-formula><mml:math id="M282" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m</oasis:entry>
         <oasis:entry colname="col8">100 <inline-formula><mml:math id="M283" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Binning:</oasis:entry>
         <oasis:entry colname="col3">none</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M284" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M285" display="inline"><mml:mrow><mml:mn mathvariant="normal">4</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">none</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M286" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M287" display="inline"><mml:mrow><mml:mn mathvariant="normal">4</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">ROI diameter:</oasis:entry>
         <oasis:entry colname="col3">10</oasis:entry>
         <oasis:entry colname="col4">5</oasis:entry>
         <oasis:entry colname="col5">3</oasis:entry>
         <oasis:entry colname="col6">10</oasis:entry>
         <oasis:entry colname="col7">5</oasis:entry>
         <oasis:entry colname="col8">3</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Desired time resolution<inline-formula><mml:math id="M288" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Exposure time</oasis:entry>
         <oasis:entry namest="col3" nameend="col8" align="center">Single-grain IR-RF signal-to-noise ratio </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">2.5 s</oasis:entry>
         <oasis:entry colname="col2">0.5 s</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">0.1<inline-formula><mml:math id="M289" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.3<inline-formula><mml:math id="M290" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">0.2<inline-formula><mml:math id="M291" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7">0.4<inline-formula><mml:math id="M292" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col8">1.0</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">5 s</oasis:entry>
         <oasis:entry colname="col2">1 s</oasis:entry>
         <oasis:entry colname="col3">0.2<inline-formula><mml:math id="M293" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">0.4<inline-formula><mml:math id="M294" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">1.1</oasis:entry>
         <oasis:entry colname="col6">0.4<inline-formula><mml:math id="M295" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7">1.4</oasis:entry>
         <oasis:entry colname="col8">2.0</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">10 s</oasis:entry>
         <oasis:entry colname="col2">2 s</oasis:entry>
         <oasis:entry colname="col3">0.5<inline-formula><mml:math id="M296" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">1.4</oasis:entry>
         <oasis:entry colname="col5">2.3</oasis:entry>
         <oasis:entry colname="col6">0.9<inline-formula><mml:math id="M297" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7">2.6</oasis:entry>
         <oasis:entry colname="col8">3.6</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">25 s</oasis:entry>
         <oasis:entry colname="col2">5 s</oasis:entry>
         <oasis:entry colname="col3">1.6</oasis:entry>
         <oasis:entry colname="col4"><bold>4.0</bold></oasis:entry>
         <oasis:entry colname="col5">4.6</oasis:entry>
         <oasis:entry colname="col6">3.5</oasis:entry>
         <oasis:entry colname="col7"><bold>5.8</bold></oasis:entry>
         <oasis:entry colname="col8">7.3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">50 s</oasis:entry>
         <oasis:entry colname="col2">10 s</oasis:entry>
         <oasis:entry colname="col3">4.3</oasis:entry>
         <oasis:entry colname="col4">7.1</oasis:entry>
         <oasis:entry colname="col5">7.1</oasis:entry>
         <oasis:entry colname="col6">6.6</oasis:entry>
         <oasis:entry colname="col7">10.0</oasis:entry>
         <oasis:entry colname="col8">11.7</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">100 s</oasis:entry>
         <oasis:entry colname="col2">20 s</oasis:entry>
         <oasis:entry colname="col3">8.6</oasis:entry>
         <oasis:entry colname="col4">11.4</oasis:entry>
         <oasis:entry colname="col5">–</oasis:entry>
         <oasis:entry colname="col6">11.9</oasis:entry>
         <oasis:entry colname="col7">16.3</oasis:entry>
         <oasis:entry colname="col8">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">200 s</oasis:entry>
         <oasis:entry colname="col2">40 s</oasis:entry>
         <oasis:entry colname="col3">14.7</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">–</oasis:entry>
         <oasis:entry colname="col6">20.3</oasis:entry>
         <oasis:entry colname="col7">–</oasis:entry>
         <oasis:entry colname="col8">–</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e5359"><inline-formula><mml:math id="M258" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula> Readout rate of 1 MHz necessary to account for short exposure times. Values without superscript apply a default readout rate of 100 kHz; <?xmltex \hack{\\}?><inline-formula><mml:math id="M259" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula> Time resolution of the processed image stack, given a image group size of <inline-formula><mml:math id="M260" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> is parameterised.</p></table-wrap-foot></table-wrap>

<?xmltex \hack{\clearpage}?>
</sec>
</app>
  </app-group><notes notes-type="codedataavailability"><title>Code and data availability</title>

      <p id="d1e6123">The <monospace>SR-RF</monospace> macro developed for this paper and used for
image processing and the software toolchain overview and tutorials
are available at <uri>http://doi.org/10.5281/zenodo.4745491</uri> <xref ref-type="bibr" rid="bib1.bibx48" id="paren.102"/>. The R package
<monospace>RLumSTARR</monospace> used for an automated data processing is available at
<uri>https://github.com/R-Lum/RLumSTARR</uri> <xref ref-type="bibr" rid="bib1.bibx38" id="paren.103"/>. The <monospace>SR-RF</monospace> macro and <monospace>RLumSTARR</monospace> are
distributed under GPL-3 licence conditions. The
data sets presented in this paper as well as the used measurement sequences and analysis scripts
are available at <uri>https://doi.org/10.5281/zenodo.4395968</uri> <xref ref-type="bibr" rid="bib1.bibx39" id="paren.104"/> and make use of
the Creative Commons License
(CC-BY-NC).</p>

      <p id="d1e6157">Please contact Dirk Mittelstraß (dirk.mittelstrass@luminescence.de) for
technical questions and Sebastian Kreutzer
(sebastian.kreutzer@aber.ac.uk) for questions on the experiments.</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d1e6160">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/gchron-3-299-2021-supplement" xlink:title="pdf">https://doi.org/10.5194/gchron-3-299-2021-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e6169">DM developed the ImageJ image-processing algorithm and investigated the image acquisition issue.
SK performed the measurements, provided the interface to
R and investigated the signal cross-talk issue. Both authors helped
Freiberg Instruments to solve technical issues. Both authors jointly
analysed the data and contributed equally to the
article.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e6175">The last upgrade of the IR-RF measurement system in
Bordeaux was financially supported by the Freiberg Instruments GmbH.
However, the manufacturer had no part in the scientific work or this
article. The authors declare no further competing
interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d1e6181">The authors developed the attached and linked software tools
with great care and the reader may find them useful. However, the
software comes without any warranty, without even the implied warranty
of merchantability or fitness for a particular
purpose.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e6187">We are grateful to three anonymous reviewers and James K. Feathers for
constructive and supportive comments. Camille Moreau is thanked for her
work in the framework of her internship at the IRAMAT-CRP2A in 2018.
Ingrid Stein and Detlev Degering are thanked for safeguarding long
forgotten data treasures. Chantal Tribolo and Norbert Mercier are
thanked for fruitful discussions and tremendous patience while waiting
for this article. The authors thank Freiberg Instruments GmbH for
their support and for suffering the noise we made. Finally, we thank
Daniel Nüst for creating and maintaining this wonderful Copernicus
markdown template shipped with <monospace>rticles</monospace> <xref ref-type="bibr" rid="bib1.bibx1" id="paren.105"/>, which made
compiling this article a lot easier. This work received financial
support from LaScArBx LabEx, a programme supported by the ANR –
no. ANR-10-LABX-52. In 2020, while the data analysis and the
article were completed. Sebastian Kreutzer has received funding from the European
Union's Horizon 2020 research and innovation programme under the Marie
Skłodowska-Curie grant agreement no. 844457 (CREDit). Dirk Mittelstraß took this
research as private endeavour and did not receive any specific grant from
funding agencies in the public, commercial or not-for-profit sectors.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e6198">This research has been supported by the European Union's Horizon 2020 research and innovation programme
under the Marie Skłodowska-Curie grant agreement no. 844457
(CREDit) and the Agence Nationale de la Recherche (grant no.
ANR-10-LABX-52).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e6204">This paper was edited by James Feathers and reviewed by three anonymous referees.</p>
  </notes><ref-list>
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    <!--<article-title-html>Spatially resolved infrared radiofluorescence: single-grain K-feldspar dating using CCD imaging</article-title-html>
<abstract-html><p>The success of luminescence dating as a chronological tool in Quaternary
science builds upon innovative methodological approaches, providing new
insights into past landscapes. Infrared radiofluorescence (IR-RF) on
K-feldspar is such an innovative method that was already introduced two decades
ago. IR-RF promises considerable extended temporal range and a simple
measurement protocol, with more dating applications being published recently.
To date, all applications have used multi-grain measurements. Herein, we take
the next step by enabling IR-RF measurements on a single grain level.
Our contribution introduces spatially resolved infrared
radiofluorescence (SR IR-RF) on K-feldspars and intends to make SR IR-RF
broadly accessible as a geochronological tool. In the first part of the
article, we detail equipment, CCD camera settings and software needed
to perform and analyse SR IR-RF measurements. We use a newly developed
ImageJ macro to process the image data, identify IR-RF emitting
grains and obtain single-grain IR-RF signal curves. For subsequent
analysis, we apply the statistical programming environment R and
the package <span style="" class="text typewriter">Luminescence</span>. In the second part of the article, we
test SR IR-RF on two K-feldspar samples. One sample was irradiated
artificially; the other sample received a natural dose. The artificially
irradiated sample renders results indistinguishable from conventional
IR-RF measurements with the photomultiplier tube. The natural sample
seems to overestimate the expected dose by ca. 50&thinsp;% on average. However,
it also shows a lower dose component, resulting in ages consistent with
the same sample's quartz fraction. Our experiments also revealed an
unstable signal background due to our cameras' degenerated cooling
system. Besides this technical issue specific to the system we used, SR
IR-RF is ready for application. Our contribution provides guidance and
software tools for methodological and applied luminescence (dating)
studies on single-grain feldspars using radiofluorescence.</p></abstract-html>
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